Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1761 ATGAGGATGGGTGGGAGTGGTAGAATGAATAAGTTGAAGCCTTACATTCTAATGGTGAGCCTGCAGTTTGGGTTTGCAGGCATGTACATAATCAGCATGGCTACCCTCAACCAAGGCATGAGCCGCTACATCCTAATCGTCTACCGAAACGCTGTCGCCGCTCTCTTCCTCGCACCTTTCGCTCTAATCTTCGAAAGGAAAACCAGGCCCAGGATGACTCTTCCCGTTGCTTTGCAAATCATGGCCTTAGGCTTTCTAGAGCCAGTTGTTGATCAGGGGTTTGGTTATTTGGGGATGAAATACACTTCCGCATCATTTACTTCTGCCATAATGAACGCTGTGCCCTCAGTTACCTTTATTATCGCAGTAATTCTACGATTGGAGCGTGTAAATATAAGGGAAGTACGAGGAGTGGCCAAGGTGGTCGGAACTGTGGTCACCTTCGCCGGAGCCTTGGTTATGACACTCTACAAAGGCCCAATTCTCGATTTCTTTTGGACTCGGAAAAACGACCACCACCGTAACAGCGGCGGCGCCGCCGCCAACCAGCACTGGGTCTCCGGAACTTTGTTCATCCTCGTCGGTTGTGTGGCGTGGTCCTGTTTCTATATTCTACAATCGATAACGGTGAAGCGATACCCAGCGGAGCTGTCTCTTTCGTCATTAATATGCTTGGCGGGTGCGCTTCAAAGCACAGTGATAGCAGTGGCAATAGAACGCCGTCCCAGCGCCTGGGCGGTGGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGGTCAGGAATTGCATATTACTTCCAAGCTCTGGTTATGAAAACCAGAGGCCCTGTATTTGTGACGGCTTTCAACCCTTTATGCATGGTGGTTGTTTCTATAATGGCCTCCATTATTCTCTCTGAGAAGCTCCATCTTGGAAGCGTTATTGGAGGCATTATCATCGCAATTGGGCTTTACTCAGTTGTGTGGGGAAAGGGCAAGGATTATTCTTCCACCGCCGGCCACCTCGATAAACCTGACGCCGCCGTGCCGGAGCTCCCAATTACGGCCACCTCTAAATTCGCCGCCGGACAAGATGCTCATGATCTTCAACCTCAAAAATAA 1113 50.13 MRMGGSGRMNKLKPYILMVSLQFGFAGMYIISMATLNQGMSRYILIVYRNAVAALFLAPFALIFERKTRPRMTLPVALQIMALGFLEPVVDQGFGYLGMKYTSASFTSAIMNAVPSVTFIIAVILRLERVNIREVRGVAKVVGTVVTFAGALVMTLYKGPILDFFWTRKNDHHRNSGGAAANQHWVSGTLFILVGCVAWSCFYILQSITVKRYPAELSLSSLICLAGALQSTVIAVAIERRPSAWAVGWDSRLLAPLYTGIVGSGIAYYFQALVMKTRGPVFVTAFNPLCMVVVSIMASIILSEKLHLGSVIGGIIIAIGLYSVVWGKGKDYSSTAGHLDKPDAAVPELPITATSKFAAGQDAHDLQPQK 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20627065 20631148 + MC04g1260 Mch4g1761 686473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1761 370 PANTHER WAT1-RELATED PROTEIN 16 332 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch4g1761 370 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
Mch4g1761 370 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
Mch4g1761 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
Mch4g1761 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0746 Mch-Chr1:11284866 Mch4g1761 Mch-Chr4:20627065 8.07E-126 dispersed
Mch4g1761 Mch-Chr4:20627065 Mch5g1316 Mch-Chr5:14029411 1.14E-115 dispersed
Mch4g1761 Mch-Chr4:20627065 Mch4g1762 Mch-Chr4:20633828 2.67E-123 tandem
Mch11g0824 Mch-Chr11:5557448 Mch4g1761 Mch-Chr4:20627065 3.60E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1761 - - - 0.0