Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1762 ATGGAAATTAGTGAAAGGCTATGGGGTATGGTGAGGAAGATGAAACCTTACTTGGCAACGGTGTTTCTACAAATTTCTTTTGCTGTTATGTACACTATTGTTGCAGTTTCTCTTAAGCACGGCCTCAGCCATTTCGTCTTTTCGGTATACCGCCATGCAGTTGCCACGCTTTTTATTGTCCCTTTCGCTCTCATTCTTGAAAGGAAAACAAGGCCTACAATGACGTTACCCATCTTCTTAAGAATATTGTTGCTTGGATTTATAGAGCCAGTGATGGACCAGAATTTATATTATTTGGGAATGAAGTACACTTCAGCAACATTCGCCTCCGCCTCCGTCAATATCCTCCCGGCCGTAACCTTCATCTTTGCCGTCGTTTTCAGGCTGGAGAGCGTGAAGGTGAGGGAAAAACATAGCGTGGCTAAGGTCGCCGGAACTGCGATCAGCCTGGGCGGAGCAATGGTTATGAGTCTGTACAAAGGGCCGGCTTTCAATCTTCTTCCGGGCGCGCGCGGTGGCTCCGAAACGACCGGAAGAATCACGACCAACGAGTCCACAGATCAGCACTGGGTCACCGGCACCATCTTGGTCCTCATCAGCTGCTGCGGCTGGTCCGCCTTCTTCATTTTACAGTCAATGACGTTGAAACTGTATCCTGCTGAGTTCTCACTCGCTGCTTTGATATGTTTCGTTGGAATGGTGGGAGGAGGAATCGTTACTCTCGTCGCTGAACGTAACATGAAGATTTGGGTTATCGGTTGGGATTCGAAACTTCTCGCTGTCGTTTACTCTGGAATAGTATGTTCGGGAACTGCATATTACGTTCAAGGAGTTGTGATGAAGGAACGAGGGCCGGTGTTCGTAACGTCGTTTAGTCCTCTCTGTATGATCGTCACGGCGGCTCTCGGCTCCTTTTTCTTGGCTGAGAAAATTCACCTGGGAAGTGTGATCGGAGCGGTGATCGTGGTAGTGGGGCTTTACACAGTGATTTGGGGCAAAACCAGAGATTTTGAAACCTCTAAAGAATCCAATAACGAATTGCCGATCACCGGCTCTACTTTCCGATCGGCGAGTGACGATTCGAACGCCGGTGAAGTTTCCGGGAAGCCGGTGGAGGCTCCGGCCAAACCTCCGGTTCCCTAA 1143 49.17 MEISERLWGMVRKMKPYLATVFLQISFAVMYTIVAVSLKHGLSHFVFSVYRHAVATLFIVPFALILERKTRPTMTLPIFLRILLLGFIEPVMDQNLYYLGMKYTSATFASASVNILPAVTFIFAVVFRLESVKVREKHSVAKVAGTAISLGGAMVMSLYKGPAFNLLPGARGGSETTGRITTNESTDQHWVTGTILVLISCCGWSAFFILQSMTLKLYPAEFSLAALICFVGMVGGGIVTLVAERNMKIWVIGWDSKLLAVVYSGIVCSGTAYYVQGVVMKERGPVFVTSFSPLCMIVTAALGSFFLAEKIHLGSVIGAVIVVVGLYTVIWGKTRDFETSKESNNELPITGSTFRSASDDSNAGEVSGKPVEAPAKPPVP 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20633828 20637101 + MC04g1261 Mch4g1762 686474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1762 380 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch4g1762 380 MobiDBLite consensus disorder prediction 343 363 - -
Mch4g1762 380 MobiDBLite consensus disorder prediction 342 380 - -
Mch4g1762 380 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020(InterPro)
Mch4g1762 380 Pfam EamA-like transporter family 22 157 IPR000620 GO:0016020(InterPro)
Mch4g1762 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Mch4g1762 380 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0824 Mch-Chr11:5557448 Mch4g1762 Mch-Chr4:20633828 7.02E-146 dispersed
Mch4g1762 Mch-Chr4:20633828 Mch5g1316 Mch-Chr5:14029411 7.35E-103 dispersed
Mch4g1761 Mch-Chr4:20627065 Mch4g1762 Mch-Chr4:20633828 2.67E-123 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1762 - - - 0.0