Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1781 ATGGAGTTGAAAGGAGATGTAGCAGAAGTCCAACAACAGCAACATTTCCATGTGCTGGCAGTGGATGATAGCCTTATTGACAGAAAGCTTTTGGAAAAGCTCCTAAGAATTTCTTCATGCGAAGTGACCTGTGTGGAATCCGGGGATAAAGCTCTGAGATATCTGGGTCTGCTTGATGACTTCGACAAATTTTCTTCTTCATTTTCTCCCCCACAAGTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGACTACTGTATGCCTGGGATGACTGGTTATGATCTACTCAAACGACTCAAGGGATCTTCCTGGAAAGATGTTCCTGTTGTTGTCATGTCATCAGAGAACGAGCCTTCAAGAATCAACATGTGCTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTATCAGATGTAAAGAAGCTTGAGCCTCACCTTCAGAAATCGCTCAGCCGTTCTTCTGCAGAAATAAAGGAAGAAACCGTCGGAATCGGAATCGAAATCGAAATCCCTGCTCCCGACGCCACTGACGACGAAAACAACTCGAAAGAAGACAGTAACAATACCTTCAGCAAGAGAAAGGCCGCGGCTCCGGAACCGTCCGAAAGAAGACCAAAACTGAAAGAGTTGCAGGCGGCGGTGTAA 663 45.7 MELKGDVAEVQQQQHFHVLAVDDSLIDRKLLEKLLRISSCEVTCVESGDKALRYLGLLDDFDKFSSSFSPPQVSQQQEVKVNLIMTDYCMPGMTGYDLLKRLKGSSWKDVPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLSRSSAEIKEETVGIGIEIEIPAPDATDDENNSKEDSNNTFSKRKAAAPEPSERRPKLKELQAAV 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20749729 20752901 + MC04g1277 Mch4g1781 686493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1781 220 SMART REC_2 16 149 IPR001789 GO:0000160(InterPro)
Mch4g1781 220 MobiDBLite consensus disorder prediction 172 220 - -
Mch4g1781 220 CDD REC_typeA_ARR 18 148 - -
Mch4g1781 220 ProSiteProfiles Response regulatory domain profile. 17 153 IPR001789 GO:0000160(InterPro)
Mch4g1781 220 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 202 IPR045279 GO:0009736(InterPro)
Mch4g1781 220 MobiDBLite consensus disorder prediction 182 220 - -
Mch4g1781 220 Gene3D - 17 216 - -
Mch4g1781 220 Pfam Response regulator receiver domain 76 146 IPR001789 GO:0000160(InterPro)
Mch4g1781 220 SUPERFAMILY CheY-like 16 147 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1566 Mch-Chr4:18960438 Mch4g1781 Mch-Chr4:20749729 1.11E-57 dispersed
Mch4g1781 Mch-Chr4:20749729 Mch9g1380 Mch-Chr9:16186608 2.55E-48 dispersed
Mch4g1781 Mch-Chr4:20749729 Mch1g0440 Mch-Chr1:8680262 2.95E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43229 PF00072 Response_reg 1.90E-18 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1781 K14492 - csv:101216267 266.929