Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1814 ATGGAGTCCCTTGTGCGACTGATCGTCATATTCATGGCGGTGAACATAGCCATATTATCAACACCCATTATAGCTTCTCAAGCCTTACCCGGCTGTGACGAATGGTGCGGCGACTTACGAATCCCATATCCATTCGGCATGAAAGAAGAGTGTTATCTCAACAAAACTTTCTCCATTAACTGCAAGAAACCCAACAACAACAATAACGAACCCCCAACCGCGTTCCTAATGGACACCAACATCAGCGTCACCAAAATAGCAATCTCCGGCGAGCTCCACGTCATGCAGCCCATAGTACGAGATTGCTACAATGTTCCAACACACCATAATGATTCCTCTGTCCCGAACATAACGTCTCTCTCGGCGCCGGCAATTTTCCCGGTTGCCGCCGCAAAAAACAAGTTCGTCACCGTCGGCTGCAACACCTTAGGCTTAATCGGCGGCGAGCTCAATGGGAGCGAATATGTAAGTGGGTGTGTTTCCGTGTGTTTGAACGAAAGTGCTATTGTTAATGGGTCCTGCTCTGGCTCTGGGTGCTGTCAGTTGGAGATTCCAAAAGGGTTGAGGAATTTGTCTTTGGCTATGTACAGTATCCCATTGAATTATACTTTGGATTTCAATCCCTGTGGGTATGCTTTTGTGACTGAAGATGAGGGGTTCGAGTTTTCGTCCAAGTATATTACAAATTTTGGAGATGAGGAAGTTGGGGTTGTGCTTGATTGGGGCATCACAAACCAAACAAATTATCATCAGTGTGGACAAAATAGCACGAGGAATAGTAGCTTCTCCGATGATGGATCTCAATATCGTTGTGAGTGCTTCAAAGGTTTCGATGGGAATCCATATCTCCCTCAAGGTTGTCAAGACATAGATGAATGCAAGAATGATACGCATGACTGCAAATATGAGTGTGTTAACACAGAAGGAAACTATACCTGCAATTGTCCAAAGGATTTTAAAGGAGATGGGAGACGAGTTGGCGTGGGGTTCACAGTTTTGCTGATTGTCAGTTCAAGATTCTACTTGGGCTACAGAAAGTGGAAATTCCTCAAATTGAAAGAGGAGTTTTTCGAGAAAAATGGAGGCTTGATGCTCCAACATCATCTTTCTCAGTGGCAATCATCCGCCGACATGGTCAGAATCTTCACCCAAGAGGAGCTGGAGAAGGCCACGAACAAGTACGATGAGAGCGCAGTGGTCGGAAAAGGCGGATACGGCACCGTTTACAAAGGAGTGCTGGAGGATGGTTTGGTAGTTGCAATAAAGAAATCGAAATTAGTGGACCAATCCCAAACTTCCCAATTCATCAACGAAGTGATGGTTCTGTCCCAAATCAACCACCGCAACGTGGTCAAGCTCTTGGGCTGCTGTTTGGAGACCCAAGTTCCATTATTGGTCTACGAGTTCATCACCAACGGCACACTTTACGACCACATCCATGACAAAGACAATCACAATTCTCTTCCATGGGAAGCCCGCTTGAGAATTGCTTCGGAAACTGCGGGGGTAATTTCGTATTTGCATTCCTCAGCCTCCACTCCAATCATCCACAGAGACATCAAGACCACCAACATACTATTAGACCAAAACTACACTGCCAAAGTCTCTGATTTCGGTGCTTCCAAGTTGGTCCCATTGGATCAAACTCAGCTGTCCACGATGGTGCAAGGGACTCTCGGGTATCTGGACCCGGAGTACCTGTTGACAAGTGAGTTGACGGAGAAGAGCGACGTGTACAGCTTTGGAATAGTGCTGATGGAGCTCATAACGGGGAAGAAGGCGGTAAGTTTCAAGGGGCCGGAAGCGGAGAGGAATCTGGCGATGTACGTGCTGAGTGCAATGAAGGAGGATCGTTTGGAAGAAGTTGTGGAGAAGGAAATGGCGAGGGAGGGGACGTTGGAGCAGATAAAAGAAGTGGCAAAGGTAGCAAAAGAGTGTTTGAGAGTAAGGGGGGAGGAGAGGCCGAGCATGAAGGAAGTAGCCATGGAGTTGGAGGGATTGAGAGTTTTGCAAGTTGAGCATTCGTGGGTTAATGATAAGAATTCATCAAACGCAGAAGAG 2061 46.82 MESLVRLIVIFMAVNIAILSTPIIASQALPGCDEWCGDLRIPYPFGMKEECYLNKTFSINCKKPNNNNNEPPTAFLMDTNISVTKIAISGELHVMQPIVRDCYNVPTHHNDSSVPNITSLSAPAIFPVAAAKNKFVTVGCNTLGLIGGELNGSEYVSGCVSVCLNESAIVNGSCSGSGCCQLEIPKGLRNLSLAMYSIPLNYTLDFNPCGYAFVTEDEGFEFSSKYITNFGDEEVGVVLDWGITNQTNYHQCGQNSTRNSSFSDDGSQYRCECFKGFDGNPYLPQGCQDIDECKNDTHDCKYECVNTEGNYTCNCPKDFKGDGRRVGVGFTVLLIVSSRFYLGYRKWKFLKLKEEFFEKNGGLMLQHHLSQWQSSADMVRIFTQEELEKATNKYDESAVVGKGGYGTVYKGVLEDGLVVAIKKSKLVDQSQTSQFINEVMVLSQINHRNVVKLLGCCLETQVPLLVYEFITNGTLYDHIHDKDNHNSLPWEARLRIASETAGVISYLHSSASTPIIHRDIKTTNILLDQNYTAKVSDFGASKLVPLDQTQLSTMVQGTLGYLDPEYLLTSELTEKSDVYSFGIVLMELITGKKAVSFKGPEAERNLAMYVLSAMKEDRLEEVVEKEMAREGTLEQIKEVAKVAKECLRVRGEERPSMKEVAMELEGLRVLQVEHSWVNDKNSSNAEE 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21045706 21049435 - MC04g1301 Mch4g1814 686526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1814 687 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 668 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Mch4g1814 687 SUPERFAMILY EGF/Laminin 287 324 - -
Mch4g1814 687 CDD EGF_CA 289 322 - -
Mch4g1814 687 FunFam Wall-associated receptor kinase 2 470 687 - -
Mch4g1814 687 Gene3D Laminin 245 326 - -
Mch4g1814 687 Pfam Protein tyrosine and serine/threonine kinase 399 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g1814 687 SUPERFAMILY Protein kinase-like (PK-like) 372 665 IPR011009 -
Mch4g1814 687 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Mch4g1814 687 FunFam Fibrillin 2 284 326 - -
Mch4g1814 687 SMART serkin_6 394 670 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1814 687 Pfam Calcium-binding EGF domain 289 320 IPR049883 -
Mch4g1814 687 ProSitePatterns Protein kinases ATP-binding region signature. 400 423 IPR017441 GO:0005524(InterPro)
Mch4g1814 687 ProSiteProfiles EGF-like domain profile. 289 322 IPR000742 -
Mch4g1814 687 FunFam Wall-associated receptor kinase 2 364 469 - -
Mch4g1814 687 CDD STKc_IRAK 400 667 - -
Mch4g1814 687 SMART egfca_6 289 328 IPR001881 GO:0005509(InterPro)
Mch4g1814 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g1814 687 Pfam Wall-associated receptor kinase galacturonan-binding 32 90 IPR025287 GO:0030247(InterPro)
Mch4g1814 687 Gene3D Transferase(Phosphotransferase) domain 1 470 684 - -
Mch4g1814 687 Gene3D Phosphorylase Kinase; domain 1 366 469 - -
Mch4g1814 687 ProSitePatterns Calcium-binding EGF-like domain signature. 289 313 IPR018097 GO:0005509(InterPro)
Mch4g1814 687 ProSiteProfiles Protein kinase domain profile. 394 677 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1350 Mch-Chr11:9638304 Mch4g1814 Mch-Chr4:21045706 4.41E-224 dispersed
Mch4g1814 Mch-Chr4:21045706 Mch6g1471 Mch-Chr6:13767983 2.92E-113 dispersed
Mch4g1814 Mch-Chr4:21045706 Mch4g1816 Mch-Chr4:21066059 5.59E-188 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77348 PF00069 Pkinase 3.30E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1814 - - - 0.0