Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1826 ATGTGCAGTGGCTTAGTTCCTAAAGGGGGCCATAGGGCCGATCATCTTCTGGGTTTTCTTTCCCGGAATCAGACTGAAAAATTCAGCTATGCCTATTCTAGTTTTAAGGGTAAAAGGGCTTCGATGGAGGACTTCTATGAGACAAGGATTTCTGAAGTTGATGGGCAGATGGTCGCTTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCCATCTTTTCAAGAATCTAAGTAGCCATCCAGACTTTATCAAAGACACAAAGACTGCAATTATTGAGGTTTTTAGACAGACAGATGCCGATTATATTAATGAAGAGAAAGGGCAAAAGAAAGATGCTGGTTCAACTGCATCAACTGCTGTTCTGTTAGGGGACCGCCTCCTTGTTGCAAATGTTGGGGATTCCAGAGTCGTTGCTTCTAGAGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGATGAACGGCAAAGGATTGAACAAGCTGGAGGTTTCGTTATTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACGATACGTTGTTGCTGATCCCGAAATTAAGGAAGAAGAAATTGATGGTGTAGATTTTATCATTATTGCGAGCGATGGACTTTGGAATGTCATATCAAATGAGGAAGCTGTAGCATTAGTGCAACACATCCAAGATGCAGAAGCGGCATCAAGAAAACTAATCCAAGAAGCTTATTCACGAGGGAGTTCCGACAACATTACATGCGTCATTGTACGATTCGGATTATCATAA 834 42.69 MCSGLVPKGGHRADHLLGFLSRNQTEKFSYAYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRHLFKNLSSHPDFIKDTKTAIIEVFRQTDADYINEEKGQKKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEQAGGFVIWAGTWRVGGILAVSRAFGDKLLKRYVVADPEIKEEEIDGVDFIIIASDGLWNVISNEEAVALVQHIQDAEAASRKLIQEAYSRGSSDNITCVIVRFGLS 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21120484 21124629 - MC04g1309 Mch4g1826 686538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1826 277 FunFam probable protein phosphatase 2C 59 21 276 - -
Mch4g1826 277 PANTHER PROTEIN PHOSPHATASE 29 272 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch4g1826 277 SUPERFAMILY PP2C-like 24 275 IPR036457 -
Mch4g1826 277 ProSiteProfiles PPM-type phosphatase domain profile. 29 274 IPR001932 -
Mch4g1826 277 SMART PP2C_4 19 272 IPR001932 -
Mch4g1826 277 Pfam Protein phosphatase 2C 31 267 IPR001932 -
Mch4g1826 277 SMART PP2C_SIG_2 22 274 IPR001932 -
Mch4g1826 277 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169(InterPro)
Mch4g1826 277 Gene3D - 20 277 IPR036457 -
Mch4g1826 277 CDD PP2Cc 28 274 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0475 Mch-Chr11:3037149 Mch4g1826 Mch-Chr4:21120484 8.86E-124 dispersed
Mch1g2098 Mch-Chr1:20339398 Mch4g1826 Mch-Chr4:21120484 9.39E-43 dispersed
Mch4g0141 Mch-Chr4:940150 Mch4g1826 Mch-Chr4:21120484 1.36E-57 dispersed
Mch4g1826 Mch-Chr4:21120484 Mch9g1452 Mch-Chr9:16876043 1.03E-47 dispersed
Mch4g1826 Mch-Chr4:21120484 Mch11g1054 Mch-Chr11:7341252 4.36E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1826 K17506 - csv:101220053 477.248