Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g1830 | ATGGTAACATCGGGGCCACCCACTCCTATAGGTGGTGCTCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCGTTTGGAAACGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGCCACCCTGGTGGTATTGACCCTGGTGCAGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTCAATAATCCTTCCTCATCATTTGTAGCATCAAATATGACAAACCCTGTTTCATCTGTCCAAGGTCAGAATCCACAATTTTCTAACCTTCCTAGTAGCCAGTTGTTATCAGATCAGCAGCAGTCACAACAACTTGAACCCCAGAACTTCCAACATAGTCAACAGTCGATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACAACAATTTCAAGCAATTCGAGGGTTGGCTGGTGTTGGATCAGTAAAATTGGAACCTCAAATGACCAACAATGATCAACATGGGCAGCAGCAACAGCAGCAGCAGCATTTGCAAACATTGAGAAATCTTGGTCCGGTGAAATTGGAATCACAACGGCTTCAATCACTGAGAGGTTTGGCACCAGTAAAAATGGAGCCCCAACAATCGGAGCAGTCATTATATCTGCATCAGCAGCAGCAGCAGCAGCAGCAGCCACAACACCAGCAGCAGTTTCTACATATGTCTAGACAGTCCTCTCAGGCAGCAGCTGCCCAAATTAATCTAATGCAACAGCAGAGGCTTTTGCAATTGCAACAACATCAGCAACAACATCTCTTAAAAAGTATGCCTCCTCAACGGCCACAATTACAACAACATTTCCAACAGCAGAACCTGCCACTGAGATCTACTGTAAAACCAGGATATGAACCTGGAATGTGTGCTCGGCGTCTGACTCATTACATGTATCAGCAGCAACACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTCGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGTGTTTCCATGTACGGGAGTGGGCGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAATCGCAAGCCTGGGCGTGGTTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTCAAGATCAAGTACGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCACAACGCATCTGGTCAGATCGTCCTGGATTATGCAAAAGCCATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCAACTTGGGGCAGCAGCTCAAAAGTACCAGTCCGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAGTAATTGTAACATGTTTGTGGCTTCAGCGCGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACGAAGAGATATGTACGATGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACGGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGCTTACAGATCAAGCTCAAGTTGCTGATGAACATCATCAGCAACAACAACAGCAATCATCTATAGCCCAGCAAAAAAATAATAACCCGAGTTCTGTCCAGGCCACTGCAGTGCAACTGACAGCTAGCAATGGTGTGGCCAGTGTAAATAACACCGTGAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGTTGGGCTTCTTCACCAGAACTCTATGAACTCCAGACAGCATAACTCTATGGCAAATGCTAGCAACTCATATGGGGGAAGTTCTGTCCAGATTCCATCTCCTGGTTCTTCCAGTACAATTCCGCCTACACAACCAAACTCTTCTACATTCCAGCCACCAACTCCTTCATCATCTAACCTTTCACAACCATCACATACAGCTGCAAATAATGCCAATCAAATGAGTGCTGCTAATTCTCCGGCAAATATGTCCATGCAACAACCCACATTGTCCGGAGATGCCGATCCTGGTGATACACAGTCCTCCGTTCAAAAGATATTACAAGAGATGATGATGAATAGTCAAATCAATGGCCCGGTGAGTCTGGTTGGCGTTGGTTCGCTGGTCAATGATATGAAAAATGTGAATGGGGTCTTACCTACAAGCAATACAGGTCTCAATAATGGGAACTGTTTAGGGGGAAACGGAACAACCAATGGTGGCCCCGGCATGGGAGGTGGCGGATATGGATCGATGGGGAGTGGGCTTGGGCAACCTGCCATGGTCAATGGAATGAGAACAGCAATGGGGAATAATTCCATTATGAACGGACGAATAGGAATGGCGTCTCTTGCTCGAGAACAAAGCATGAATGGTCAACCACAGGATTTGGGAAACCAGCTTCTAAGCGGACTAGGAGCTGTAAATGGCTTTAGTAATCTCCAATATGACTGGAAGCCATCCCCATGA | 2736 | 45.18 | MVTSGPPTPIGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGGIDPGAEPDPLSGVGNGMSFNNPSSSFVASNMTNPVSSVQGQNPQFSNLPSSQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQQQFQAIRGLAGVGSVKLEPQMTNNDQHGQQQQQQQHLQTLRNLGPVKLESQRLQSLRGLAPVKMEPQQSEQSLYLHQQQQQQQQPQHQQQFLHMSRQSSQAAAAQINLMQQQRLLQLQQHQQQHLLKSMPPQRPQLQQHFQQQNLPLRSTVKPGYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSAIQNASSNLSTPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGLTDQAQVADEHHQQQQQQSSIAQQKNNNPSSVQATAVQLTASNGVASVNNTVNQPSTSNSASTIVGLLHQNSMNSRQHNSMANASNSYGGSSVQIPSPGSSSTIPPTQPNSSTFQPPTPSSSNLSQPSHTAANNANQMSAANSPANMSMQQPTLSGDADPGDTQSSVQKILQEMMMNSQINGPVSLVGVGSLVNDMKNVNGVLPTSNTGLNNGNCLGGNGTTNGGPGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNGRIGMASLAREQSMNGQPQDLGNQLLSGLGAVNGFSNLQYDWKPSP | 911 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21153202 | 21160399 | - | MC04g1313 | Mch4g1830 | 686542 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 596 | 638 | - | - | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 104 | 172 | - | - | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 239 | 273 | - | - | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 682 | 770 | - | - | |
Mch4g1830 | 911 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 902 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 589 | 638 | - | - | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 241 | 273 | - | - | |
Mch4g1830 | 911 | MobiDBLite | consensus disorder prediction | 72 | 172 | - | - | |
Mch4g1830 | 911 | Pfam | LIM-domain binding protein | 339 | 593 | IPR029005 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0179 | Mch-Chr10:1067208 | Mch4g1830 | Mch-Chr4:21153202 | 5.21E-101 | dispersed | |
Mch11g1379 | Mch-Chr11:9841805 | Mch4g1830 | Mch-Chr4:21153202 | 0 | dispersed | |
Mch4g1830 | Mch-Chr4:21153202 | Mch6g2529 | Mch-Chr6:27197826 | 5.84E-103 | transposed |
Pathway information
