Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1830 ATGGTAACATCGGGGCCACCCACTCCTATAGGTGGTGCTCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTGCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCGTTTGGAAACGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGCCACCCTGGTGGTATTGACCCTGGTGCAGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTCAATAATCCTTCCTCATCATTTGTAGCATCAAATATGACAAACCCTGTTTCATCTGTCCAAGGTCAGAATCCACAATTTTCTAACCTTCCTAGTAGCCAGTTGTTATCAGATCAGCAGCAGTCACAACAACTTGAACCCCAGAACTTCCAACATAGTCAACAGTCGATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACAACAATTTCAAGCAATTCGAGGGTTGGCTGGTGTTGGATCAGTAAAATTGGAACCTCAAATGACCAACAATGATCAACATGGGCAGCAGCAACAGCAGCAGCAGCATTTGCAAACATTGAGAAATCTTGGTCCGGTGAAATTGGAATCACAACGGCTTCAATCACTGAGAGGTTTGGCACCAGTAAAAATGGAGCCCCAACAATCGGAGCAGTCATTATATCTGCATCAGCAGCAGCAGCAGCAGCAGCAGCCACAACACCAGCAGCAGTTTCTACATATGTCTAGACAGTCCTCTCAGGCAGCAGCTGCCCAAATTAATCTAATGCAACAGCAGAGGCTTTTGCAATTGCAACAACATCAGCAACAACATCTCTTAAAAAGTATGCCTCCTCAACGGCCACAATTACAACAACATTTCCAACAGCAGAACCTGCCACTGAGATCTACTGTAAAACCAGGATATGAACCTGGAATGTGTGCTCGGCGTCTGACTCATTACATGTATCAGCAGCAACACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTCGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAGTGGTGTGTTTCCATGTACGGGAGTGGGCGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAATCGCAAGCCTGGGCGTGGTTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTCAAGATCAAGTACGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCACAACGCATCTGGTCAGATCGTCCTGGATTATGCAAAAGCCATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCAACTTGGGGCAGCAGCTCAAAAGTACCAGTCCGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAGTAATTGTAACATGTTTGTGGCTTCAGCGCGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACGAAGAGATATGTACGATGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACGGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGCTTACAGATCAAGCTCAAGTTGCTGATGAACATCATCAGCAACAACAACAGCAATCATCTATAGCCCAGCAAAAAAATAATAACCCGAGTTCTGTCCAGGCCACTGCAGTGCAACTGACAGCTAGCAATGGTGTGGCCAGTGTAAATAACACCGTGAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGTTGGGCTTCTTCACCAGAACTCTATGAACTCCAGACAGCATAACTCTATGGCAAATGCTAGCAACTCATATGGGGGAAGTTCTGTCCAGATTCCATCTCCTGGTTCTTCCAGTACAATTCCGCCTACACAACCAAACTCTTCTACATTCCAGCCACCAACTCCTTCATCATCTAACCTTTCACAACCATCACATACAGCTGCAAATAATGCCAATCAAATGAGTGCTGCTAATTCTCCGGCAAATATGTCCATGCAACAACCCACATTGTCCGGAGATGCCGATCCTGGTGATACACAGTCCTCCGTTCAAAAGATATTACAAGAGATGATGATGAATAGTCAAATCAATGGCCCGGTGAGTCTGGTTGGCGTTGGTTCGCTGGTCAATGATATGAAAAATGTGAATGGGGTCTTACCTACAAGCAATACAGGTCTCAATAATGGGAACTGTTTAGGGGGAAACGGAACAACCAATGGTGGCCCCGGCATGGGAGGTGGCGGATATGGATCGATGGGGAGTGGGCTTGGGCAACCTGCCATGGTCAATGGAATGAGAACAGCAATGGGGAATAATTCCATTATGAACGGACGAATAGGAATGGCGTCTCTTGCTCGAGAACAAAGCATGAATGGTCAACCACAGGATTTGGGAAACCAGCTTCTAAGCGGACTAGGAGCTGTAAATGGCTTTAGTAATCTCCAATATGACTGGAAGCCATCCCCATGA 2736 45.18 MVTSGPPTPIGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGGIDPGAEPDPLSGVGNGMSFNNPSSSFVASNMTNPVSSVQGQNPQFSNLPSSQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQQQFQAIRGLAGVGSVKLEPQMTNNDQHGQQQQQQQHLQTLRNLGPVKLESQRLQSLRGLAPVKMEPQQSEQSLYLHQQQQQQQQPQHQQQFLHMSRQSSQAAAAQINLMQQQRLLQLQQHQQQHLLKSMPPQRPQLQQHFQQQNLPLRSTVKPGYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSAIQNASSNLSTPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGLTDQAQVADEHHQQQQQQSSIAQQKNNNPSSVQATAVQLTASNGVASVNNTVNQPSTSNSASTIVGLLHQNSMNSRQHNSMANASNSYGGSSVQIPSPGSSSTIPPTQPNSSTFQPPTPSSSNLSQPSHTAANNANQMSAANSPANMSMQQPTLSGDADPGDTQSSVQKILQEMMMNSQINGPVSLVGVGSLVNDMKNVNGVLPTSNTGLNNGNCLGGNGTTNGGPGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNGRIGMASLAREQSMNGQPQDLGNQLLSGLGAVNGFSNLQYDWKPSP 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21153202 21160399 - MC04g1313 Mch4g1830 686542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1830 911 MobiDBLite consensus disorder prediction 596 638 - -
Mch4g1830 911 MobiDBLite consensus disorder prediction 104 172 - -
Mch4g1830 911 MobiDBLite consensus disorder prediction 239 273 - -
Mch4g1830 911 MobiDBLite consensus disorder prediction 682 770 - -
Mch4g1830 911 PANTHER LIM DOMAIN-BINDING PROTEIN 1 902 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Mch4g1830 911 MobiDBLite consensus disorder prediction 589 638 - -
Mch4g1830 911 MobiDBLite consensus disorder prediction 241 273 - -
Mch4g1830 911 MobiDBLite consensus disorder prediction 72 172 - -
Mch4g1830 911 Pfam LIM-domain binding protein 339 593 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0179 Mch-Chr10:1067208 Mch4g1830 Mch-Chr4:21153202 5.21E-101 dispersed
Mch11g1379 Mch-Chr11:9841805 Mch4g1830 Mch-Chr4:21153202 0 dispersed
Mch4g1830 Mch-Chr4:21153202 Mch6g2529 Mch-Chr6:27197826 5.84E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1830 - - - 0.0