Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1847 ATGCACTCGTCTTCTTCTCCGATCTTTTTGCTTCATTTGTTCTTCTTGATCCTCTCCGATTTCGCCTCCGCTTTCTTGCCCGCCGAGAACGTTACCCTCTCCGGTGACGCCCGTCTCCGAAACAACGCCATTCTTCTCACTCAAGAACTCAATTGCCTTCCCTTTTCTTCCAATTCCCCCTCCTCCTCCTCCTCCTCCGGCGTCGGAAGAGCCTTCTACATAAACCCTATTCGCTTTCTTGATTTCGCCACCAATTCCACCGCCTCTTTCTCCTCCCGGTTCTCCCTCTCCATCCTCCCCACCCCTCTCTGTCCTTTCCCCGATGGAATCGCTTTTCTCCTCACCTCCGATTCCAAATCTTTCACCCCTTCTCGTGGCTACATGGGCCTCCCTGACCCGCCCCCAAATTCCCACCACTCTTTCATCGCCGTCGAATTCGACACCAATTTCGACCCAACTCTCGGTGACATTAACGATAACCATATCGCCGTTGATGTGAATACACCTACATCTTTGGCTTCTGTGGATGCTGGGTCGAGGGGCATTGTTCTGAAAAATGGGAGACAGGTTACTGTTTGGATCGAGTACAGGGACGACTCCAAGATGATCCGGGTCTGGGTCGGGTATTCGCAGACCCGACCCGCAAACCCAATTCTGGTTTCGCAGATTGACCTCTCCAGGCAATTCAAGGAGTTCATGTATGTGGGGTTCTCTGCCTCCAATGGACAGGGCTCTGCACTTTACATGGTCCATAGATGGCGCTTCAAAACTTTTGGGTTAGTCCCTTCTCTCATTCCTGTTGACACGGTTAATGGAGGAGACTGTTTCATGTGCTCGACGGAGGATTCGAGCGCTAACAACAGTCGGATCGTTGATCCTCGGAAAAGGAGGAAGAAGATTGGAGAGATGGCCCTTGGTTTGGGAGGTTTAGCTGCATTTTTGTGCTCCATTGTTGCAATTGTTGGTTTGGCTACCTTTGTTTTGATAAAGAAACTGAGAGGTAGAATGAGAAGAGGCAGAGGAAGCGATAGAACCTGTGAAGTTGAGATGAACAGGGTTCCAACAAGATTGTCTCTGGGGGAGATAAAGTCGGCTACAATGGGGTTTAATCAAAACAGAGTTGTTGGGGAAGGTGGTTCTGCAGTTGTCTACAAAGGGTCTCTTCCGTCTGGTGGGGACGTGGCTGTTAAGCGGTTTGAGCGATCGGGAAACGATCGTCTCTGCAATCCTTTCACCACGGAGTTCGCAACAATGGTGGGTTGCTTAAGACACAAGAATTTGGTTCAGCTTTATGGATGGTGCTGCGAGGCAAATGAGTTGGTCCTTGTTTATGAGTACTTGCCCAATGGAAGCCTTGCCAAACTACTTCACAAGAGCTCCTCCAATTCACTGTTTATCCTTCCTTGGAAGAAGAGATTCTCCATAGTTCTTGGAGTTGCTTCAGCCCTGACTTATCTTCATGAAGAGTGTGAGAGCCAAGTTATCCACAGAGACGTCAAGACCTGCAACATCATGCTTGATGCAGAGTTCAACGCAAAACTAGGGGATTTCGGTTTAGCAGAAGTGTATGAACACAGCTCGATCACTAGGGAAGCAACCATACCAGCGGGGACAATGGGATATCTTGCCCCTGAATATGTTTATTCTGGCGTTCCTACCGTCAAAACTGACGTTTACAGCTTCGGCGTGGTGTTGCTTGAAGTTGCATCGGGAAGGAGGCCAGTAAACGACGACGGGACGGTGCTTGTCGATTGGGTTTGGGATCTATGGGAAATTGGGAGACTGATTGAAGCTTCTGATTCAAGGTTGATGGGAAAGTACAATATAGTAGAAATGGAGAGAATGCTAATGGTAGGACTTTTCTGTGTACACCCAAATCATGAAAATAGGCCAACTGTGAAAGAGGCTGCAAGGATTCTTAGAGGGGAAGCACCACTCCCTCCACTGCCATCAAGGAAACCAAGAGTAAGCATCAGGCCCGTTTTCGATCCCGACGATGTCGAAGACGTTGAGAATTATTGTGGCAGTTATCTCGGGCTCGATGAGTCGGCATGGATGACCCCCAAGAGCCAATTTAGC 2079 49.06 MHSSSSPIFLLHLFFLILSDFASAFLPAENVTLSGDARLRNNAILLTQELNCLPFSSNSPSSSSSSGVGRAFYINPIRFLDFATNSTASFSSRFSLSILPTPLCPFPDGIAFLLTSDSKSFTPSRGYMGLPDPPPNSHHSFIAVEFDTNFDPTLGDINDNHIAVDVNTPTSLASVDAGSRGIVLKNGRQVTVWIEYRDDSKMIRVWVGYSQTRPANPILVSQIDLSRQFKEFMYVGFSASNGQGSALYMVHRWRFKTFGLVPSLIPVDTVNGGDCFMCSTEDSSANNSRIVDPRKRRKKIGEMALGLGGLAAFLCSIVAIVGLATFVLIKKLRGRMRRGRGSDRTCEVEMNRVPTRLSLGEIKSATMGFNQNRVVGEGGSAVVYKGSLPSGGDVAVKRFERSGNDRLCNPFTTEFATMVGCLRHKNLVQLYGWCCEANELVLVYEYLPNGSLAKLLHKSSSNSLFILPWKKRFSIVLGVASALTYLHEECESQVIHRDVKTCNIMLDAEFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVLLEVASGRRPVNDDGTVLVDWVWDLWEIGRLIEASDSRLMGKYNIVEMERMLMVGLFCVHPNHENRPTVKEAARILRGEAPLPPLPSRKPRVSIRPVFDPDDVEDVENYCGSYLGLDESAWMTPKSQFS 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21279065 21281143 - MC04g1328 Mch4g1847 686559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1847 693 CDD STKc_IRAK 375 640 - -
Mch4g1847 693 SUPERFAMILY Concanavalin A-like lectins/glucanases 10 261 IPR013320 -
Mch4g1847 693 FunFam L-type lectin-domain containing receptor kinase S.6 336 446 - -
Mch4g1847 693 Pfam Legume lectin domain 27 257 IPR001220 GO:0030246(InterPro)
Mch4g1847 693 SMART serkin_6 369 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1847 693 ProSiteProfiles Protein kinase domain profile. 369 649 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1847 693 CDD lectin_legume_LecRK_Arcelin_ConA 30 259 IPR001220 GO:0030246(InterPro)
Mch4g1847 693 SUPERFAMILY Protein kinase-like (PK-like) 349 640 IPR011009 -
Mch4g1847 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g1847 693 PANTHER - 48 650 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Mch4g1847 693 Pfam Protein kinase domain 370 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1847 693 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524(InterPro)
Mch4g1847 693 FunFam L-type lectin-domain containing receptor kinase VIII.1 447 658 - -
Mch4g1847 693 Gene3D - 18 261 - -
Mch4g1847 693 Gene3D Transferase(Phosphotransferase) domain 1 447 644 - -
Mch4g1847 693 Gene3D Phosphorylase Kinase; domain 1 333 446 - -
Mch4g1847 693 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1275 Mch-Chr10:10500425 Mch4g1847 Mch-Chr4:21279065 1.50E-25 dispersed
Mch1g1092 Mch-Chr1:13748807 Mch4g1847 Mch-Chr4:21279065 3.33E-36 dispersed
Mch4g0191 Mch-Chr4:1268758 Mch4g1847 Mch-Chr4:21279065 1.32E-08 dispersed
Mch4g1847 Mch-Chr4:21279065 Mch5g1763 Mch-Chr5:18190556 8.34E-136 dispersed
Mch5g1517 Mch-Chr5:16224523 Mch4g1847 Mch-Chr4:21279065 1.18E-08 dispersed
Mch4g1847 Mch-Chr4:21279065 Mch5g1860 Mch-Chr5:18765416 1.29E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77351 PF00069 Pkinase 9.90E-42 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1847 - - - 0.0