Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1881 AAGTTAAACATAAATAATCTGGAGCAACAACAAACCGCGTTGGAGATCGAAAGCAAGGAATTCGACTACTCCAAACGCGCCCAATGGCTACGCGCCGCCGTGCTCGGCGCCAACGACGGTCTCGTCTCGACGGCGTCGCTAATGATGGGAGTTGGAGCCGTCAAACAAGACATCAAGGCCATGATCCTCACCGGCTTCGCCGGCCTCGTCGCCGGCGCGTGTAGCATGGCCATCGGCGAGTTCGTGTCCGTGTACTCGCAGCTGGACATTGAAGTGGCGCAAATGAAGAGAGAGAAACAAAGAACCAATTTGGGATCAGACCAAAGGGTAGAGAGAGAGACGGCCGCCGGCCGGAAAGATGAAGAGAAGCTGCCCAACCCACTTCAGGCTGCCGCTGCCTCCGCCCTCGCCTTCTCCATCGGCGCAATTGTGCCGTTGCTTGCCGCCTCCTTCATAACAAACTACAAGGTCAGGCTCGCCGTCGTCGTGGCCGCAGTCACGTTGGCTCTTGCCGTGTTCGGTTGGTTGGGCGCCATCCTCGGAAAAGCTTCCCCCATCAGATCCGCCTCAAGAGTGTTGGTCGGAGGTTGGCTGGCCATGGCCATAACCTTCGGGTTGACTAAGTTAATAGGATCAAGTGGACTC 645 57.05 KLNINNLEQQQTALEIESKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKQRTNLGSDQRVERETAAGRKDEEKLPNPLQAAAASALAFSIGAIVPLLAASFITNYKVRLAVVVAAVTLALAVFGWLGAILGKASPIRSASRVLVGGWLAMAITFGLTKLIGSSGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21508360 21509004 + MC04g1343 Mch4g1881 686593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1881 215 Pfam VIT family 30 103 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Mch4g1881 215 Pfam VIT family 120 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Mch4g1881 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 7 212 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Mch4g1881 215 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1402 Mch-Chr11:10232589 Mch4g1881 Mch-Chr4:21508360 1.53E-89 dispersed
Mch4g0945 Mch-Chr4:7420920 Mch4g1881 Mch-Chr4:21508360 7.33E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1881 K22736 - csv:116402413 332.028