Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1909 AGAGCTCTAATGGAAGGAGCAATCAGTCGATTACTTAACCGGTATCTGTTGTACTCCATAGCCATGTGCTTAAGCTTAACCATGGGGAGCTCATTAGTCGTCTCTCTCTCTCCTGACGGAGAAGCGCTTCTCTCTCTCATCGCTGCTGCTGGTTCTTCTGCATCATCGTCTTCCTCTGTTCTTGCTTCTTGGAATCCATCTAGCCCTAATCCATGTTCTTGGGAAGGCATCACTTGCTCTCCTCAGAACAGAGTCATTTCAATTTCTCTCCCCAAAACATTTCTGAATCTCTCGTTTTTGCCTCACGAATTGTCTTCTCTCTCTGCTCTGCAACTTCTTAATCTCTCCTCCACCAATGTCTCTGGTTCAATCCCTCCTTCTTTTGGGCAACTCACCAATCTTCGCCTGCTGGACCTCTCCTCCAACAATCTCTATGGCCCCATTCCTTCACAGCTTGGTTCTCTTTCTTCACTTCAATTCCTTTTCCTGAATTCCAATAGACTGTCTGGTAAGATTCCTCCGCAGCTTGCTAATCTGACTTCTCTGCAAAGTCTTTGCCTCCAGGACAATCTGTTTAACGGCTCCATTCCATCACAATTTGGTTCTTTGGTGTCCCTCCAAGAGTTCCGGATCGGAGGGAATCCATATCTTTCCGGAGAGATTCCGCCAGAAATAGGACTGCTTACTAATCTCACGACGTTTGGAGCAGCGGCTACCGCCCTTTCTGGGGCTATACCGTCTACATTCGGGAACCTAATCAACCTTCAAACTTTGGCACTCTATGATACTGAGATGTCTGGTTCAATACCTCCTGAACTGGGACTTTGTTCTGAGCTGAGGGATTTGTATTTACACATGAACAAGCTCAATGGTGAGATTCCTCCTCAGCTGGGTAGGTTGCAGAAGCTTACTAGTTTGTTTCTCTGGGGCAATGCTCTATCAGGAGCCATACCGTCTGAGATTTCCAATTGTTCTGCACTTGTTGTTTTTGATGCTTCTGAGAATGATCTTTCAGGCGAAATCCCAAGTGATATAGGGAAGTTGGTCGTTCTCGAACAATTTCATCTATCTGACAATTCAATCTCGGGGACGATACCGTGGCAGTTGGGCAACTGCTCAAGCTTAACTGCCCTTCAGCTTGATAATAATCAATTATCAGGTGTTATACCACCACAACTTGGCAATTTGAAATCCCTGCAGAGTTTTTTCTTATGGGGAAATTCTGTATCAGGAACCATACCATCTTCGTTTGGCAACTGCACTGAGTTGTATGCCCTTGATCTTTCAAGAAACAAGCTCACTGGGATAATCCCAGAAGAAATTTTCAGCTTGAAGAAGTTGAGCAAGCTTTTGCTCCTTGGAAATTCTTTATCTGGCGGGTTGCCACGAAGTGTCGCGAATTGTCAATCACTGGTGAGGTTGAGGCTTGGAGAAAACCAGCTTTCAGGTCAGATTCCGAAGGAGGTAGGCCGGTTGCAAAATCTCGTCTTTCTCGACTTGTATATGAATCATTTTTCAGGTGGTCTTCCGTCCGAGATAGCTAATATCACAGTTCTTGAGCTACTCGATGTGCATAATAATTATATTACTGGAGAAATTCCTCCCCAGCTTGGGGAGCTGGTGAACTTGGAGCAGCTTGATCTCAGTCGAAACAGCTTCACTGGTGAAATTCCTGAGAGCTTTGGAAACTTTAGTTATTTGAATAAAATTATTCTCAACAACAATCTGCTGACAGGGTCAATTCCAAAGTCCATTAAGAACCTGGAGAAACTAACTCTACTTGATTTGAGTTACAACAGCCTCTCTGGCTCCATACCACCAGAAATTGGTTATATGAAGAGCTTGTCAATCAGTCTAGACTTGAGCTCCAACGGGATAACCGGAGAAATTCCCGAGACGATGTCTAGTTTGACACAGTTACAATCACTCGATCTTTCCCACAACATGCTTTATGGAAATATTAAAGTGTTGGGTCTCCTGACTAGTCTCACTTCACTTAATATCTCCTACAACAATTTCTCAGGTCCTATGCCTGTAACGCCATTCTTCCGAACCCTATCGGAAGATGCATATTATCGAAACCTGAATCTTTGTGAATCACTTGATGGGTTTACTTGTTCTTCGAGTTCAATGGGAAGAAATGGCTTAAAGTCTGCAAAAGCTGCAGCTTTGATCTCCATCATTCTTGCTGCAGTTATCATCCTACTTTTTGCTTCATGGATGCTAGTTTCACGAAATCGTAAGTACATGGCGGAGAAATATTCCGGGACATTGTCCTCTGCATCGGCTGCCGAGGATTTCTCTTATCCCTGGACCTTCATCCCCTTTCAGAAGCTGAACTTTACCATAGATAACATCTTAGAATCCATGAAAGATGAAAATATAATTGGAAAAGGTTGTTCTGGAGTTGTCTATAAAGCAGATATGCCAAATGGGGAATTAGTTGCTGTGAAGAAACTGTGGAAAACGAAGCAAGATGAAGAAGCAATTGACTCATGTGCTGCGGAGATTCAAATTCTCGGGCATATTCGACATCGCAACATAGTGAAGCTCATAGGATATTGTTCCAATAGAAGTGTCAAGCTACTTCTCTACAACTACATTTCAAATGGTAATCTGCAACAACTCTTGCAAGGAAACAGGAATTTGGATTGGGAGACTAGGTATAAGATCGCAGTCGGGACGGCCCAGGGTCTGGCTTATCTTCATCACGATTGTGTGCCTGCGATTCTTCACAGAGATGTCAAGTGCAATAATATACTTTTAGACTCGAAGTATGAAGCTTATCTAGCAGATTTTGGCCTGGCAAAGTTGATGAACACTCCAAATTATCACCATGCAATTTCGAGAGTAGCCGGGTCTTACGGTTATATTGCCCCAGAATATGGATACACCATGAACATAACGGAGAAGAGTGATGTCTATAGCTATGGAGTCGTTTTGCTGGAGATACTAAGTGGCCGCAGCGCAATCGAGACACAACTCGGAGATGGTCTTCACATCGTAGAGTGGGTGAAGAAGAAGATGGCAAGCTACGAACCCGCCATAACGATACTCGACACAAAGCTCCAAGGGCTTCCAGATCAAATTGTGCAAGAAATGCTTCAAACACTTGGAATAGCAATGTTCTGTGTGAATTCCTCTCCAGCAGAAAGGCCAACAATGAAGGAAGTGGTAGCATTATTGATGGAGGTAAAGAGTCCTCCAGAAGAATGGGGCAAAACCTCCCAACCTCTAATAAAGCAATCCTCAAACTTAAGTTGA 3264 43.69 RALMEGAISRLLNRYLLYSIAMCLSLTMGSSLVVSLSPDGEALLSLIAAAGSSASSSSSVLASWNPSSPNPCSWEGITCSPQNRVISISLPKTFLNLSFLPHELSSLSALQLLNLSSTNVSGSIPPSFGQLTNLRLLDLSSNNLYGPIPSQLGSLSSLQFLFLNSNRLSGKIPPQLANLTSLQSLCLQDNLFNGSIPSQFGSLVSLQEFRIGGNPYLSGEIPPEIGLLTNLTTFGAAATALSGAIPSTFGNLINLQTLALYDTEMSGSIPPELGLCSELRDLYLHMNKLNGEIPPQLGRLQKLTSLFLWGNALSGAIPSEISNCSALVVFDASENDLSGEIPSDIGKLVVLEQFHLSDNSISGTIPWQLGNCSSLTALQLDNNQLSGVIPPQLGNLKSLQSFFLWGNSVSGTIPSSFGNCTELYALDLSRNKLTGIIPEEIFSLKKLSKLLLLGNSLSGGLPRSVANCQSLVRLRLGENQLSGQIPKEVGRLQNLVFLDLYMNHFSGGLPSEIANITVLELLDVHNNYITGEIPPQLGELVNLEQLDLSRNSFTGEIPESFGNFSYLNKIILNNNLLTGSIPKSIKNLEKLTLLDLSYNSLSGSIPPEIGYMKSLSISLDLSSNGITGEIPETMSSLTQLQSLDLSHNMLYGNIKVLGLLTSLTSLNISYNNFSGPMPVTPFFRTLSEDAYYRNLNLCESLDGFTCSSSSMGRNGLKSAKAAALISIILAAVIILLFASWMLVSRNRKYMAEKYSGTLSSASAAEDFSYPWTFIPFQKLNFTIDNILESMKDENIIGKGCSGVVYKADMPNGELVAVKKLWKTKQDEEAIDSCAAEIQILGHIRHRNIVKLIGYCSNRSVKLLLYNYISNGNLQQLLQGNRNLDWETRYKIAVGTAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGLAKLMNTPNYHHAISRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAIETQLGDGLHIVEWVKKKMASYEPAITILDTKLQGLPDQIVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEWGKTSQPLIKQSSNLS 1087
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21750389 21754002 + MC04g1369 Mch4g1909 686621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1909 1087 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524(InterPro)
Mch4g1909 1087 Gene3D Ribonuclease Inhibitor 387 489 IPR032675 -
Mch4g1909 1087 SUPERFAMILY Protein kinase-like (PK-like) 774 1063 IPR011009 -
Mch4g1909 1087 ProSiteProfiles Protein kinase domain profile. 790 1080 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1909 1087 ProSiteProfiles Leucine-rich repeat profile. 639 661 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine rich repeat N-terminal domain 37 80 IPR013210 -
Mch4g1909 1087 Gene3D Transferase(Phosphotransferase) domain 1 868 1077 - -
Mch4g1909 1087 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 659 1065 IPR050647 -
Mch4g1909 1087 Gene3D Ribonuclease Inhibitor 35 97 IPR032675 -
Mch4g1909 1087 SMART LRR_typ_2 588 612 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 131 154 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 300 324 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 155 178 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 372 396 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 179 203 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 420 444 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 540 563 IPR003591 -
Mch4g1909 1087 SMART LRR_typ_2 637 662 IPR003591 -
Mch4g1909 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g1909 1087 Gene3D Phosphorylase Kinase; domain 1 759 867 - -
Mch4g1909 1087 Pfam Protein kinase domain 792 1059 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1909 1087 PRINTS Leucine-rich repeat signature 637 650 - -
Mch4g1909 1087 PRINTS Leucine-rich repeat signature 423 436 - -
Mch4g1909 1087 Gene3D Ribonuclease Inhibitor 98 235 IPR032675 -
Mch4g1909 1087 Gene3D Ribonuclease Inhibitor 498 707 IPR032675 -
Mch4g1909 1087 Gene3D Ribonuclease Inhibitor 236 386 IPR032675 -
Mch4g1909 1087 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 524 710 - -
Mch4g1909 1087 SUPERFAMILY L domain-like 60 410 - -
Mch4g1909 1087 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 36 199 - -
Mch4g1909 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 868 1080 - -
Mch4g1909 1087 SMART serkin_6 790 1066 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1909 1087 FunFam Putative LRR receptor-like serine/threonine-protein kinase 775 867 - -
Mch4g1909 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 215 438 - -
Mch4g1909 1087 Pfam Leucine rich repeat 542 601 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 SUPERFAMILY L domain-like 389 701 - -
Mch4g1909 1087 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 446 517 - -
Mch4g1909 1087 Pfam Leucine Rich Repeat 374 396 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 157 179 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 618 637 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 662 678 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 494 515 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 351 372 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 519 540 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515(InterPro)
Mch4g1909 1087 Pfam Leucine Rich Repeat 181 203 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0270 Mch-Chr10:1746879 Mch4g1909 Mch-Chr4:21750389 3.25E-89 dispersed
Mch11g1430 Mch-Chr11:10808714 Mch4g1909 Mch-Chr4:21750389 7.81E-111 dispersed
Mch4g1909 Mch-Chr4:21750389 Mch6g0134 Mch-Chr6:803128 5.25E-91 dispersed
Mch4g1909 Mch-Chr4:21750389 Mch7g0882 Mch-Chr7:13388969 3.48E-108 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77354 PF00069 Pkinase 1.70E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1909 - - - 0.0