Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1944 ATGATGAACTCCATGGGAATCTTTGAAGATATTGGATTTTGCCGAAATCTTGACTATTTTTCGGCACCTCCTGGTGAACAAGAGATGGCTCGGGAGCATGAACCTGAGGCCACTTTGGAGGAAGATTATAGCGATGAAGAGATGGATGTTGATGAGCTTGAGAGAAGGATGTGGAGAGACCGAATGCTTTTGAGGCGGCTCAAAGAACAAAACAAAGAGAAGGAAGGGACTGATAATTCAAAGCAGCGTCAGTCCCAGGAACAGGCCCGAAGGAAGAAGATGTCTCGAGCTCAAGATGGTATCCTGAAATATATGTTGAAAATGATGGAGGTTTGTAAAGCTCAAGGTTTCGTTTACGGGATCATTCCCGAGAAAGGAAAGCCAGTCAGTGGAGCTTCTGATAATCTTCGTGCCTGGTGGAAAGAGAAAGTCAGGTTCGATAGAAATGGCCCTGCAGCCATTGCTAAATATCAAGCTGACCATGCAATTCCTGGGAAGAACGATGACTGCAATACAGTGACATCCACACCTCACACTTTACAAGAACTCCAAGACACAACCCTTGGATCACTTTTGTCGGCTCTGATGCAGCACTGTGATCCACCGCAGAGGCGTTTTCCATTGGAGAAGGGAGCTTCCCCACCGTGGTGGCCCACTGGAAACGAAGAATGGTGGCCTGAATTGGGATTACCCAAGGACCAGGGGCCTCCCCCTTATAAGAAGCCCCATGATCTGAAAAAGGCTTGGAAAGTCAGTGTTCTCACTGCTGTGATTAAGCACATGTCTCCCGACATTGCCAAAATTCGCAAGCTTGTTCGTCAGTCTAAATGTTTGCAAGACAAAATGACTGCCAAGGAGAGTGCTACATGGCTGGCCATTGTAAACCAGGAAGAAGCACTGGCCAGGAAATTGTATCCCGATAAATGCCCACCTGTGGCGATTTGCGGGAGTGGATCTCTTTTAATCAGTGACACTAGTGATTACGATGTTGAAGGAATAGAAGATGAACCCCATGTCGAAGCAGAGGAAAACAAACCGCACGATCTCAGTTTCTTTAATATGGGGGCTTCTGGAGCTAGAGAGAGGCTTATGATGCCACCATTGGGACCTCAGATTAAGGAAGAATTCATGGAGAACAATTCAGACTTTATTCAAAAGAGAAAGCAGTTGACTGATGAGTCGAATACAATGATGAATCAGAAGATATATACTTGCGAGTATTCTCAATGCCCTTATAACAGTCAGCGCCTCGGGTTTCTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGAGTGATTCTTCCCACATATTTGGCATGCCGAGCTTTCAAACCAACGATGACAAATCATCTCCAGTTCCTCCATCCTTCAACCACTCTAAGCCACCTTCTCGGCCAATGAACCAGAATCATCCACCCTTCAGAGTTTCAGGACTTGGACTTCCGGAAGATGGCCAGAAAATGATTTCTGACCTTCTGAGCTTCTACGATTCTAACCTTCAACATGACAAAGCTTTGAATTCTGGTAACGTTGTCGAAGCTAGAGAGGATCATCACAACACACAGCTGCAGAAATTCCAACTTCAAGTCGATGATAACTTGTATTGCCAAGGAGCAGCAATGGTAGGAACTAGCATGCCAATCCAGCAGCACCCTGATTTTTCTTCAACAAAAGTCCCATTTGAGGAGTACAAGGCATTCGATTCTCCATTCGGCATGTATCCCAACGATAACATCGCAGACTTCAGATTCGGTTCTCCATTTAACTTGGCATCCATTGATTATGCAGTCGACCCGCCATTGCCCAAGCAAGATACACCCTTGTGGTATCTCTGA 1848 45.73 MMNSMGIFEDIGFCRNLDYFSAPPGEQEMAREHEPEATLEEDYSDEEMDVDELERRMWRDRMLLRRLKEQNKEKEGTDNSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGKNDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGASPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDKCPPVAICGSGSLLISDTSDYDVEGIEDEPHVEAEENKPHDLSFFNMGASGARERLMMPPLGPQIKEEFMENNSDFIQKRKQLTDESNTMMNQKIYTCEYSQCPYNSQRLGFLDRTSRNNHQLNCPFRSDSSHIFGMPSFQTNDDKSSPVPPSFNHSKPPSRPMNQNHPPFRVSGLGLPEDGQKMISDLLSFYDSNLQHDKALNSGNVVEAREDHHNTQLQKFQLQVDDNLYCQGAAMVGTSMPIQQHPDFSSTKVPFEEYKAFDSPFGMYPNDNIADFRFGSPFNLASIDYAVDPPLPKQDTPLWYL 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21943136 21947384 - MC04g_new0544 Mch4g1944 686656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1944 615 FunFam Ethylene insensitive 3-like 1 83 161 - -
Mch4g1944 615 Gene3D - 83 163 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Mch4g1944 615 FunFam Ethylene insensitive 3-like 1 171 308 - -
Mch4g1944 615 Coils Coil 36 87 - -
Mch4g1944 615 Pfam Ethylene insensitive 3, DNA-binding domain 51 298 IPR047091 GO:0003700(InterPro)
Mch4g1944 615 Coils Coil 373 393 - -
Mch4g1944 615 MobiDBLite consensus disorder prediction 67 94 - -
Mch4g1944 615 MobiDBLite consensus disorder prediction 443 459 - -
Mch4g1944 615 SUPERFAMILY DNA-binding domain of EIN3-like 177 301 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Mch4g1944 615 MobiDBLite consensus disorder prediction 443 474 - -
Mch4g1944 615 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 9 604 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Mch4g1944 615 MobiDBLite consensus disorder prediction 24 50 - -
Mch4g1944 615 Gene3D - 175 308 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1944 Mch-Chr4:21943136 Mch6g1072 Mch-Chr6:7712561 1.32E-248 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43241 PF04873 EIN3 2.60E-131 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1944 K14514 - csv:101214396 1111.67