Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch4g1994 | ATGGCGTTTCTCTCTTCCATTTCCTCCGACGACTCCATCGTTTTCGCCTCCGTTTTGGCTTTCGCAGTCTCTGCCTTCATCTTCCTTATCACACGCAAATCCACCTCTAACCGTCGCCTGAATCTTCCTCCGGGGCCCCGCGGCTGGCCGGTCGTCGGAAACCTCTTCCAGGTCGCTCGCTCCGGCAAGCATTTCTTCGAATACGTCGAGGACATCCGCCAGGTTTACGGCCCAATCTTCACTCTCAAGATGGGCTCTCGAACCACGATCGTCCTCAGCGGCGCCGATCTCATCCACGAAGCCCTAATCAAGCGCGGCGCCACCTTCGCCAGCCGCCCCGCCGAGAATCCGACGCGAATCGTCTTCAGCAGCAACAAATTCTCCGTCAACGCCGCCGTCTACGGCTCCCTCTGGCGCTCCCTCCGCCGGAACATGGTCGAGAACATGCTCTGTTCTAGTCGGTTGAAAGAGTTTCGCGACGTGAGGAAAAACGCCATGGATAAGCTCGTCCAGCGCATTCGAGCGGAAGCCGTGGCCAACGACGGCGCCGTTTGGATCCTCAAAAACGCTCGATTCGCTGTTTTCTGTATTCTCTTGGCGATGTGCTTTGGTTTAGAAATGGAGGAAGAATCGGTGGAGAAAATGGATCAAGTTCTGAAGACCGTTCTCATCACTGTCGATCCGAGAATCGACGATTTTCTCCCCATTTTGCGGCCGTTCTTCTCGAAGCAGCGGAAGCGCGCCATGGAAGTGAGAACAGAGCAAATCGAATTCGTCGTTCAGTTCATCAATCGGCGTAGAAAAGCACTTCAAAATCCAGGTTCAGACATTACCGCAACTTCATTTTCGTACCTCGACACGCTCTTCGATCTCAAGGTCGACGGCCGGAAACCTTCCCCGACCGACGCCGAATTAGTCACACTCTGTTCCGAATTCCTCAACGGCGGCACCGATACGACGGCCACCGCCGTCGAATGGGGAATCGCGGAGCTCATCGCAAACCATAAAATCCAAAACAAACTACACGACGAGATCAAACAATTGGTCGGCGATAGGAAAGTGGACGAATCAGACATTGAGAAATTGCCGTATCTTCAAGCGGTAGTGAAGGAATTGCTGAGAAGACATCCGCCGACGTACTTCACCCTGACGCACTCGGCGACCGAGGCGACGAAACTCGCCGGATACGACATTCCGGTGGACGCGAACGTGGAGGTTTACTTGGCCGGAATCAGCAACGATCCGAAGGTGTGGAGGAATCCGGAGAAATTCGAGCCGGAAAGATTCTTGAGCGGCGACGATGATTCAGATATCACGGGAGTGAAAAGTGTGAAGATGATTCCATTCGGAGTGGGGAGGAGAATCTGCCCTGGATTGGGAATGGCGACGATTCATGTTCATCTGATGCTGGCGAGATTGGTTCAGGAATTTGAATGGAGTTCGTATCCGCCGAACGCTGAATTGGATTTCACGAGGAAGTACGAATTTACTGTGGTGATGAAGAATTCTCTCAGAGCCATGCCCACAATCAGACTTTGA | 1539 | 53.28 | MAFLSSISSDDSIVFASVLAFAVSAFIFLITRKSTSNRRLNLPPGPRGWPVVGNLFQVARSGKHFFEYVEDIRQVYGPIFTLKMGSRTTIVLSGADLIHEALIKRGATFASRPAENPTRIVFSSNKFSVNAAVYGSLWRSLRRNMVENMLCSSRLKEFRDVRKNAMDKLVQRIRAEAVANDGAVWILKNARFAVFCILLAMCFGLEMEEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFSKQRKRAMEVRTEQIEFVVQFINRRRKALQNPGSDITATSFSYLDTLFDLKVDGRKPSPTDAELVTLCSEFLNGGTDTTATAVEWGIAELIANHKIQNKLHDEIKQLVGDRKVDESDIEKLPYLQAVVKELLRRHPPTYFTLTHSATEATKLAGYDIPVDANVEVYLAGISNDPKVWRNPEKFEPERFLSGDDDSDITGVKSVKMIPFGVGRRICPGLGMATIHVHLMLARLVQEFEWSSYPPNAELDFTRKYEFTVVMKNSLRAMPTIRL | 512 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 22319813 | 22321705 | - | MC04g_new0557 | Mch4g1994 | 686706 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch4g1994 | 512 | SUPERFAMILY | Cytochrome P450 | 43 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | CDD | CYP77_89 | 76 | 505 | - | - | |
| Mch4g1994 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 23 | 509 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Mch4g1994 | 512 | Pfam | Cytochrome P450 | 43 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | FunFam | Cytochrome P450 family protein | 36 | 512 | - | - | |
| Mch4g1994 | 512 | Gene3D | Cytochrome P450 | 27 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | P450 superfamily signature | 456 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 73 | 92 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 97 | 118 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g1994 | 512 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch4g1994 | Mch-Chr4:22319813 | Mch5g1309 | Mch-Chr5:13961575 | 8.45E-66 | dispersed | |
| Mch1g1769 | Mch-Chr1:18077314 | Mch4g1994 | Mch-Chr4:22319813 | 9.06E-153 | transposed | |
| Mch2g1239 | Mch-Chr2:8589764 | Mch4g1994 | Mch-Chr4:22319813 | 2.79E-87 | transposed | |
| Mch4g1994 | Mch-Chr4:22319813 | Mch9g1841 | Mch-Chr9:20224563 | 3.68E-256 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch4g1994 | K21995 | - | csv:101206763 | 852.047 |