Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g2047 | ATGGAATCCCACCGTGATAAAAACGGCACCGTTGGACGCGTGGATCACTCTTTATCTGTGTGCGGCGGTGTGGCGTCGTACTGGGGCGCCGCGGCGGAGGGCCTCATGGGGAGCCATTTTGACGAGGTCAAACGCATGGTCGCAGAGTTTCGTCGGCCTTTGGTTCGGCTTGGCGGTGAGACCCTCACGATTGCACAAGGTAACGAGATATTGATTGTACGATTTTTAAACGCTGGAATTTTTGGGAATGATCCAAATTCTCTCAACACATTGCCACAGTCAGCAACACGAGCCGCTATGCTTGTGAGAATCAACACTCTTTTGCAAGGCTATTCGAGGATTAGGTTTGAAATTTTAGAAGCCATAACCAGATTGCTCAACCATTACATAACCCCATGTCTTCCTCTTAGAGGCACAATTACTGCTTCTGGTGACCTCGTCCCTCTCTCTTACATTGTTGCACTTTTGATTGCCGAAAAGAAGGTCTTGCTCTTGTTAATGGCACAGCGGTTGGCTCTGGCTTGGCCTCCATAG | 534 | 49.44 | MESHRDKNGTVGRVDHSLSVCGGVASYWGAAAEGLMGSHFDEVKRMVAEFRRPLVRLGGETLTIAQGNEILIVRFLNAGIFGNDPNSLNTLPQSATRAAMLVRINTLLQGYSRIRFEILEAITRLLNHYITPCLPLRGTITASGDLVPLSYIVALLIAEKKVLLLLMAQRLALAWPP | 177 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22712733 | 22716296 | - | MC04g_new0562 | Mch4g2047 | 686759 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g2047 | 177 | PANTHER | HISTIDINE AMMONIA-LYASE | 25 | 69 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Mch4g2047 | 177 | Gene3D | - | 71 | 172 | IPR024083 | - | |
Mch4g2047 | 177 | SUPERFAMILY | L-aspartase-like | 27 | 164 | IPR008948 | GO:0003824(InterPro) | |
Mch4g2047 | 177 | Pfam | Aromatic amino acid lyase | 72 | 163 | IPR001106 | - | |
Mch4g2047 | 177 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 138 | 154 | IPR022313 | GO:0016841(InterPro) | |
Mch4g2047 | 177 | Gene3D | - | 22 | 70 | IPR024083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g2047 | Mch-Chr4:22712733 | Mch6g0950 | Mch-Chr6:6730339 | 2.88E-25 | dispersed | |
Mch1g0817 | Mch-Chr1:11724681 | Mch4g2047 | Mch-Chr4:22712733 | 1.37E-50 | wgd | |
Mch4g2047 | Mch-Chr4:22712733 | Mch9g1792 | Mch-Chr9:19796163 | 3.76E-50 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch4g2047 | K10775 | - | gmx:100801470 | 160.229 |