Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2062 ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAGTTCGCCGCCGCAGTCCCAATTTCCGGCGTTGGCGCCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAATGGATGCCCGGCCAGCCCCGCCCGCCGTACCTCGACGGCTCAGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTGCCAGAGAATCTCGAGAGGTTCAAGGAGTCTGAGCTGATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCGTTGGGTTTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCAGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTCTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGTGGTGCTTTCGACCCATTGGGCTACTCAAAGGACCCTGAAAAGTTGAAGGAATACAAAGTCAAAGAGATAAAAAATGGACGGCTAGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGAAATATTTCGCCTTGA 741 54.93 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVGANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRNISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22844328 22846065 - MC04g1499 Mch4g2062 686774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2062 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 13 235 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Mch4g2062 246 FunFam Chlorophyll a-b binding protein, chloroplastic 51 237 - -
Mch4g2062 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Mch4g2062 246 SUPERFAMILY Chlorophyll a-b binding protein 39 240 - -
Mch4g2062 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0627 Mch-Chr1:10424657 Mch4g2062 Mch-Chr4:22844328 3.68E-42 dispersed
Mch4g2062 Mch-Chr4:22844328 Mch9g2370 Mch-Chr9:23612786 4.25E-44 dispersed
Mch4g2062 Mch-Chr4:22844328 Mch6g0241 Mch-Chr6:1588441 7.35E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2062 K08907 - csv:101211428 496.508