Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2105 ATGGAGATTACGTACGCATCACCCAGCGCGACTAGCCTTGCTTCATCCAATTCTGCCCTTTCCTCCATGCCTGCCTCGAGCCGACCGGTCAAGGTCATTCCCCTGCAGCATCCTAGCACGACGTCGTCATCTCCCTCCGGTGCTTCTGCCGGAGCTCTGGTGAAGACATGGACGGCGAAGGTGAAGCGGATGACTTGGATTCAATGGATGGAGCTTTTGCTGCCTTGCTCCCGCTGGATTAGAACGTATAAATGGCGGGAATATTTACAGAGCGATCTATTGTCCGGGATTACTATTGGCATCATGCTCGTTCCGCAGGCAATGTCTTATGCAAAATTAGCTGGGCTTCGACCAATATATGGACTTTATTCTGGTTTCTTCCCTCTGTTCGTCTATGCATTTTTTGGTTCTTCACGTCAGCTTGCAGTTGGTCCAGTAGCATTGGTTTCTCTCTTGGTTTCTAATGTCTTGGGTGGAATTGTCAATTCATCTGAGGAACTATATACTGAACTTGCAATATTACTGGCACTCATGGTTGGAATATTGGAATGTGTGATGGGGCTGTTGAGGCTGGGATGGATTATTCGCTTTATCAGTCACTCTGTAATCTCTGGCTTTACTTCGGCTTCTGCCATTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTACGATGTATCAAGAAGTAGCAAAATCGTGCCACTAATTGAGAGCATAATAGCTGGAGCTGACGGGTTCTTATGGCCGCCTTTCATAATGGGGTCAGTCATCCTTGCGGTACTTCAGATCATGAAGCATTTGGGAAAAACAAGAAAGCACTTACGTTTTCTCAGAGTTGCTGGTCCCCTCACAGCAGTTGTTATGGGCACAACTTTGGCGAAAGTATTGAATGTACCTTCCATTTCTTTGGTTGGAGACATTCCCCAAGGCCTTCCAAAGTTTTCTGTTCCTAAAAGATTCGAGCATGTGAAGTCTTTGATTCCAACTGCATTTCTGATCACAGGAGTTGCTATATTGGAATCTGTTGGGATTGCCAAAGCATTAGCAGCAAAGAATGGGTACGAGTTAGATTCAAATCAGGAGTTATTTGGTCTTGGAGTATCCAATGTCGTTGGCTCATTTTTTTCAGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCCGTGAGCCACGAAAGTGGAGCTAAAACTGGCTTATCTCAGATTGTTACAGGAATGGTCATGGGTGGGGCCCTTCTTTTCCTGACTCCATTGTTTAAGTACATACCTCAGTGTGCATTGGCTGCCATTGTGATCTCTGCTGTAATAACTTTGGTGGATTACGACGAGGCTATTTTTTTGTGGCGCATTGACAAGAAAGATTTTCTTCTATGGGTGATTACTGCTATTTCTACGTTGTTTCTTGGCATTGAGATTGGCGTCTTAATTGGGGTGGGTGTTTCACTAGTCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACTACTGTGTACAGAAATGTTCAACAGTATCCAGAGGCATATACTTACAACGGAATTGTGATTGTTCGGATTGATGCACCAATTTATTTTGCAAACACGAGTTTCATCAAAGACAGGTTACGTGAATATGAAGTTGAAGTTGACCGATCTACTGGTCGTGGGCCAGATGTTGAGAGAGTTTATTTCGTTATTATAGAGATGGCACCCGTTACTTATATAGATTCTAGTGCTGTCCAGGCTTTCAAAGAATTGTATCAGGAATACAAACTTCGAGATATTCAGATTGCCATTTCCAATCCGAATCGAGAAGTTCTGCTTACATTTTCAAGATCCGGTGTCGTCGAGCTTATTGGCAAGGAGTGGTTCTTTGTGAGAGTTCATGATGCAGTTCAAGTCTGTCTTCAGCATGTGGAGAGCTTAAAGGAGACAAACAGGAGATCAGATTCTTCACCAAATGATGCATCAAGCTTTCTCCAAAGCTTAGTGAAATCCAGAAGTGAGGATTTATCAGTTAGCCAATTAGAGGCAGGCATCAAAAAGCTTCCAAGTTCCAATGAAATTGACCCTCGATTGGAACCATTGCTGCCTCGAATGCCTTGA 2109 43.95 MEITYASPSATSLASSNSALSSMPASSRPVKVIPLQHPSTTSSSPSGASAGALVKTWTAKVKRMTWIQWMELLLPCSRWIRTYKWREYLQSDLLSGITIGIMLVPQAMSYAKLAGLRPIYGLYSGFFPLFVYAFFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGILECVMGLLRLGWIIRFISHSVISGFTSASAIVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGADGFLWPPFIMGSVILAVLQIMKHLGKTRKHLRFLRVAGPLTAVVMGTTLAKVLNVPSISLVGDIPQGLPKFSVPKRFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVVGSFFSAYPTTGSFSRSAVSHESGAKTGLSQIVTGMVMGGALLFLTPLFKYIPQCALAAIVISAVITLVDYDEAIFLWRIDKKDFLLWVITAISTLFLGIEIGVLIGVGVSLVFVIHESANPHMAVLGRLPGTTVYRNVQQYPEAYTYNGIVIVRIDAPIYFANTSFIKDRLREYEVEVDRSTGRGPDVERVYFVIIEMAPVTYIDSSAVQAFKELYQEYKLRDIQIAISNPNREVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLKETNRRSDSSPNDASSFLQSLVKSRSEDLSVSQLEAGIKKLPSSNEIDPRLEPLLPRMP 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23112478 23121328 + MC04g1534 Mch4g2105 686817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2105 702 PANTHER SULFATE TRANSPORTER 53 638 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g2105 702 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch4g2105 702 ProSiteProfiles STAS domain profile. 512 636 IPR002645 -
Mch4g2105 702 NCBIfam sulfate permease 75 632 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g2105 702 SUPERFAMILY SpoIIaa-like 514 636 IPR036513 -
Mch4g2105 702 Gene3D STAS domain 492 640 IPR036513 -
Mch4g2105 702 FunFam Sulfate transporter 31 492 639 - -
Mch4g2105 702 Pfam Sulfate permease family 89 462 IPR011547 GO:0016020(InterPro)
Mch4g2105 702 Pfam STAS domain 513 632 IPR002645 -
Mch4g2105 702 CDD STAS_SulP_like_sulfate_transporter 513 629 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2105 Mch-Chr4:23112478 Mch9g0897 Mch-Chr9:6980842 1.24E-119 dispersed
Mch4g2105 Mch-Chr4:23112478 Mch11g0790 Mch-Chr11:5322321 2.00E-122 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2105 K18059 - csv:101202870 1180.62