Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2113 ATGGAGCAGCCCGCCGGAAATTTGAGTCATGCAAAGCCATTTTTTGCAGTGATTCTTCAGCAGTTCATCACTGCCGGAATGGCCATCATTTCCAAGCTCGCTCTCAACCAAGGGATGAACCAACACGTGTTGGTCGTCTACCGCTACTCCATTGCCACCGTCTTCGTCGCTCCCTTTGCCCTCCTCTTCGAAAGGAAAGTGAGGCCGACAATGACGTGGTCCACATTTGGGAAGATTGTGTTGTTGGGGTTATTTGAGCCAGCACTGGACCAGAATTTGTATTACACAGGAATGAAGTACACCACGGCTACTTTTGCATCTGCTATGACCAATATGGCCCCAGCATTTGTGTTCCTTATGGCTTGGATTGTCCGGCTTGAGAAGGTTAACATAAGGCGGACCGAGAGCCAGGCGAAGATTTTAGGTACAGTGGTGACTGTAGGAGGGGCGATGGTAATGACTTTGGTAAGAGGACCGATCTTAAATCTGCCATGGACAAATCACAACCACCATCAAGCTTCCGCAACTACAGCCAACCAGCAAGATCTCAAGGGTGCTCTCATGATCACTTCAGGCTGTATTTTTTGGTCTGCTTTCAATGTTCTTCAGGCAATTACCATAAAGTCATACCCAGCTAGACTCTCCTTAACAGCTTGGATATGCTTCACTGGCGCCGTGCAAGCTACAGTGATAGCTTTAGCAATGGAATGGCACAGCCCTGCAGCCTGGTCATTGCATTTAGATTCCACCCTCTTAGCTCCTTTATACAGTGGAATCATGTCTTCAGGGGTTTCATATACCATTCAAGCAGCGGTAATGAAGACAAAAGGACCAGTTTTTGCAACCACATTTAGTCCCCTGAGCATGGTTATTGTTGCAATTATTAGTTCGTTCATACTATCCGAGATATTGTACTTAGGAAGGATTATTGGAGCAGCTGTAATTATTACAGGTCTTTATTTAGTTCTGTGGGGTAAAAGCAAGGATCAGACTCCATACAATTCAGCAAGTGAGAAGATGGTCCCATCAGATCAGAAAATGACTGCAATAACTGACAAACCTAAGACTACAGAAAAAGAACTTGTAGTCGATCTAACTAGAATAAGAACAGTGGATGATTCGGTTTGA 1128 45.12 MEQPAGNLSHAKPFFAVILQQFITAGMAIISKLALNQGMNQHVLVVYRYSIATVFVAPFALLFERKVRPTMTWSTFGKIVLLGLFEPALDQNLYYTGMKYTTATFASAMTNMAPAFVFLMAWIVRLEKVNIRRTESQAKILGTVVTVGGAMVMTLVRGPILNLPWTNHNHHQASATTANQQDLKGALMITSGCIFWSAFNVLQAITIKSYPARLSLTAWICFTGAVQATVIALAMEWHSPAAWSLHLDSTLLAPLYSGIMSSGVSYTIQAAVMKTKGPVFATTFSPLSMVIVAIISSFILSEILYLGRIIGAAVIITGLYLVLWGKSKDQTPYNSASEKMVPSDQKMTAITDKPKTTEKELVVDLTRIRTVDDSV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23195641 23199684 - MC04g1540 Mch4g2113 686825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2113 375 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
Mch4g2113 375 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
Mch4g2113 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Mch4g2113 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 328 - -
Mch4g2113 375 PANTHER WAT1-RELATED PROTEIN 16 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2113 Mch-Chr4:23195641 Mch5g1316 Mch-Chr5:14029411 6.66E-108 dispersed
Mch4g2113 Mch-Chr4:23195641 Mch4g2115 Mch-Chr4:23216640 1.99E-98 proximal
Mch10g1574 Mch-Chr10:15868994 Mch4g2113 Mch-Chr4:23195641 6.70E-35 transposed
Mch1g0746 Mch-Chr1:11284866 Mch4g2113 Mch-Chr4:23195641 2.73E-135 wgd
Mch4g2113 Mch-Chr4:23195641 Mch9g1572 Mch-Chr9:17986224 6.28E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2113 - - - 0.0