Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2116 ATGAGCCCCTTTGTGTATTCCCTCTATCGTTTTTTTGTTGCCGCCATTGTTGTAGCTCCATTTGCCTTACACTTTGACAGAAAAAGAAGACCACAGATGACTTGGCCCATCTTTGCCAAGATTCTATTGCTCGGCTCTATGGACTCTTTGGTTATCCCCAACATGTATTTCAGTGCTCTGAAATATGTAACTCCAACTTTCTCCATTGCTATGTCCAACGTTGTTCCTGCCTTTTCCTTCTTCTTCGCTGTCATTTTCAGGATGGAGAAGGTTGATATTAGGAGACTTTCATCCCAGGCAAAGATATTGGGAACTATAGTGGCAGTGGGAGGGGCAATGATAATGACCTTTTTTGGAGGCCCAAACTTGAGATTTCCTTGGACAAAATTAGAACATTTACACAATCACTCTAATTCAACTCCTCCTTCAAACACCCATCAAGATTCTTTGAAGGGTGTCATTTTGACCACAATTGCTTGTATCTGCTCTTCTGTTTCATGCATTCTCCAGGCAGTTGTATTAAAATCATATCCAGTGGGGCTGAGTTTGACAGTTTTGGTGAGTTTGGTGGGAGTTGTGGAAGGAGCTATGGTAGCTTTAGCAATGGAATGGAGAAACTCTTGTGCCTGGTCACTTCATTTTGATTTTCAACTCTTGGTCATCCTTTATGCTGGAATAATAATGTCGGGGCTTTCGTACTACGTTCGAGGAGGTGTAATTAAGGAAAAAGGGCCTGTGTTCTTTACAGCATTTTCCCCTCTAAGCACTGTCATTGTTGCAATCATAAGCTCATTCGCACTCTCTGAGGTTTTTTCTTTGGGAAAGATTTTGGGAGGAGTGGTCATAATAATAGGACTTTATTTGGTTATGTGGGGCAAAACCAAAGATCCAGCCATTGATGAGCCATCCAATAATTCTTCGCAGAGCCTCCATGTTTCAAACCATCAAGATCATCAACAACTTAAACCAACTAATGAGGTTTCTAAGGCAACAAGGGATGGTTTAGTTTGA 1011 41.44 MSPFVYSLYRFFVAAIVVAPFALHFDRKRRPQMTWPIFAKILLLGSMDSLVIPNMYFSALKYVTPTFSIAMSNVVPAFSFFFAVIFRMEKVDIRRLSSQAKILGTIVAVGGAMIMTFFGGPNLRFPWTKLEHLHNHSNSTPPSNTHQDSLKGVILTTIACICSSVSCILQAVVLKSYPVGLSLTVLVSLVGVVEGAMVALAMEWRNSCAWSLHFDFQLLVILYAGIIMSGLSYYVRGGVIKEKGPVFFTAFSPLSTVIVAIISSFALSEVFSLGKILGGVVIIIGLYLVMWGKTKDPAIDEPSNNSSQSLHVSNHQDHQQLKPTNEVSKATRDGLV 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23226066 23229998 - MC04g_new0575 Mch4g2116 686828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2116 336 MobiDBLite consensus disorder prediction 301 336 - -
Mch4g2116 336 Pfam EamA-like transporter family 1 115 IPR000620 GO:0016020(InterPro)
Mch4g2116 336 Pfam EamA-like transporter family 151 290 IPR000620 GO:0016020(InterPro)
Mch4g2116 336 PANTHER WAT1-RELATED PROTEIN 1 305 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch4g2116 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 210 294 - -
Mch4g2116 336 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 119 - -
Mch4g2116 336 MobiDBLite consensus disorder prediction 301 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2116 Mch-Chr4:23226066 Mch9g1572 Mch-Chr9:17986224 1.71E-97 dispersed
Mch4g2115 Mch-Chr4:23216640 Mch4g2116 Mch-Chr4:23226066 5.06E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2116 - - - 0.0