Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2128 ATGGCCGGTAAAGGAGAGGGTCCGGCGATCGGAATCGATCTTGGGACGACGTACTCTTGCGTCGGAGTTTGGCAGCATGACCGTGTTGAGATTATTGCCAACGACCAGGGCAACCGGACGACGCCGTCGTATGTTGCTTTCACCGACTCCGAGCGCCTGATCGGTGATGCGGCCAAGAATCAGGTCGCCATGAACCCTATCAACACCGTCTTCGATGCGAAGCGTCTAATTGGTAGAAGATTTAGCGATTCATCGGTCCAGAGTGATATTAAGCTCTGGCCATTCAAAGTTATCCCCGGTGCCGGTGACAAGCCCATGATTGTGGTGAACTACAAGGGTGAGGAGAAGCAGTTTTCGGCGGAAGAAATCTCTTCTATGGTGCTCATTAAGATGAAGGAGATTGCTGAGGCGTATCTGGGCACAACGGTGAAGAATGCCGTTGTCACTGTCCCAGCCTACTTTAACGATTCACAGAGACAGGCCACCAAAGATGCTGGTGTCATCTCAGGCCTAAACGTGATGCGTATCATCAATGAACCAACTGCTGCCGCCATTGCTTATGGTCTTGACAAGAAGGCTACCAGCTCCGGTGAGAAGAATGTTCTAATTTTTGATTTGGGTGGTGGTACTTTTGATGTTTCACTGCTCACGATCGAGGAAGGTATTTTTGAGGTGAAGGCAACGGCAGGTGACACCCATCTTGGTGGTGAGGATTTTGATAACAGATTGGTTAATCACTTCGTGCAGGAATTTAAGAGAAAGAACAAGAAAGACATTAGTGGGAATCCCAGGGCTCTTAGGAGATTGAGAACTTCTTGTGAGAGGGCGAAGAGGACTCTCTCTTCCACAGCTCAAACTACAATAGAGATTGATTCTCTGTACGAGGGAATCGACTTCTATTCAACCATTACCCGTGCTAGATTTGAGGAACTCAACATGGACCTTTTCAGGAAGTGTATGGAACCCGTTGAGAAGTGCTTGAGAGATGCTAAGATGGACAAGAGCAGTATTCATGACGTGGTTCTTGTTGGTGGCTCTACTAGGATTCCCAAGGTGCAGCAGTTGTTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTGGCCTACGGAGCTGCAGTCCAGGCCGCCATTCTGAGCGGCGAGGGCAACGAGAAGGTTCAGGATCTGTTGCTTCTGGATGTCACCCCTCTGTCCCTTGGACTGGAAACGGCTGGTGGTGTGATGACTGTCCTAATTCCAAGGAACACCACCATCCCCACCAAGAAGGAACAAGTTTTCTCTACCTACTCCGACAACCAACCCGGAGTTTTGATCCAAGTCTATGAAGGAGAGAGGGCAAGAACCCGTGACAACAACTTGCTAGGAAAATTTGAGCTCTCTGGAATCCCTCCGGCCCCTAGAGGTGTTCCTCAAATTACCGTCTGCTTCGATATTGATGCCAATGGTATCCTGAATGTTTCTGCGGAGGATAAGACCACCGGCCAGAAGAACAAGATCACAATTACCAACGACAAGGGGCGGTTGTCGAAGGAGGAGATTGAGAAGATGGTCCAGGAAGCAGAGAAATACAAGGCCGACGATGAAGAGCACAAGAAGAAGGTTGAATCCAAGAACTCGCTGGAAAACTATGCGTACAACATGAGGAACACTGTGAGGGATGAGAAGTTTAGCTCTAAACTGGACCCAGCAGACAAGAAGAAGATCGAGGATGCGATCGAGCAGGCGATCCAATGGCTGGACAACAACCAACTTGCAGAGGCGGACGAGTTTGAAGACAAAATGAAGGAGCTGGAGAACATTTGCAACCCAATCGTTGCCAAGATGTACCAGGGTGCTGGTGGTGCCGGCGGCATGGGCGGTGCTGGCATGGATGATGACGATGTTCCCCCACCAGCAGGCGGCAGCGGCGCTGGTCCCAAAATTGAGGAAGTCGAC 1959 49.92 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDSSVQSDIKLWPFKVIPGAGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAYLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVESKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEQAIQWLDNNQLAEADEFEDKMKELENICNPIVAKMYQGAGGAGGMGGAGMDDDDVPPPAGGSGAGPKIEEVD 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23316148 23318533 + MC04g1551 Mch4g2128 686840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2128 653 FunFam Heat shock 70 kDa protein 71 126 - -
Mch4g2128 653 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Mch4g2128 653 Coils Coil 521 541 - -
Mch4g2128 653 Coils Coil 588 608 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 209 219 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 58 66 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 337 353 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 36 48 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 396 415 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 146 166 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 369 389 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 477 493 - -
Mch4g2128 653 PRINTS 70kDa heat shock protein signature 8 21 - -
Mch4g2128 653 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Mch4g2128 653 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Mch4g2128 653 FunFam Heat shock protein 70 10 197 - -
Mch4g2128 653 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Mch4g2128 653 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Mch4g2128 653 Gene3D - 71 126 - -
Mch4g2128 653 Gene3D - 545 653 IPR029048 -
Mch4g2128 653 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Mch4g2128 653 Gene3D - 192 366 - -
Mch4g2128 653 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch4g2128 653 MobiDBLite consensus disorder prediction 619 653 - -
Mch4g2128 653 FunFam Heat shock 70 kDa 391 545 - -
Mch4g2128 653 Gene3D Actin; Chain A, domain 4 235 318 - -
Mch4g2128 653 FunFam Heat shock 70 kDa 235 318 - -
Mch4g2128 653 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Mch4g2128 653 Gene3D - 10 384 - -
Mch4g2128 653 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mch4g2128 653 FunFam Heat shock 70 kDa protein 198 261 - -
Mch4g2128 653 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 625 IPR029048 -
Mch4g2128 653 FunFam Heat shock 70 kDa protein 539 653 - -
Mch4g2128 653 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Mch4g2128 653 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2128 Mch-Chr4:23316148 Mch4g2139 Mch-Chr4:23372273 0 dispersed
Mch10g0385 Mch-Chr10:2560285 Mch4g2128 Mch-Chr4:23316148 6.73E-183 transposed
Mch11g0931 Mch-Chr11:6375295 Mch4g2128 Mch-Chr4:23316148 2.45E-59 transposed
Mch4g1154 Mch-Chr4:12401800 Mch4g2128 Mch-Chr4:23316148 5.25E-167 transposed
Mch5g0606 Mch-Chr5:4024541 Mch4g2128 Mch-Chr4:23316148 1.10E-86 transposed
Mch6g0608 Mch-Chr6:4139539 Mch4g2128 Mch-Chr4:23316148 0 transposed
Mch6g1960 Mch-Chr6:22077131 Mch4g2128 Mch-Chr4:23316148 3.37E-285 transposed
Mch9g0474 Mch-Chr9:3511734 Mch4g2128 Mch-Chr4:23316148 2.89E-291 transposed
Mch1g0731 Mch-Chr1:11173406 Mch4g2128 Mch-Chr4:23316148 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2128 K03283 - csv:101210925 1201.81