Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2139 ATGGCGGGAAAGGGCGAGGGTCCGGCCATTGGTATCGATCTCGGTACGACTTACTCGTGTGTTGGAGTATGGCAGCACGATCGTGTTGAGATTATTGCGAATGATCAGGGGAATCGAACGACGCCGTCTTATGTTGGTTTCACCGATAGCGAGCGTCTCATCGGCGATGCTGCTAAGAACCAGGTCGCTATGAATCCCATCAACACTGTCTTCGATGCGAAACGGTTGATTGGAAGGAGATTTTCCGACCCCTCGGTCCAGAGCGATATGAAATTGTGGCCGTTCAAGGTCATCGCCGGTCCAGGTGACAAACCGATGATCGTCGTCAACTATAAAGGCGAAGAGAAGCAATTTGCCGCTGAAGAAATCTCATCCATGGTCCTCACCAAAATGCGTGAGATAGCTGAAGCTTACCTCGGCTCGTCTATCAAGAACGCGGTCGTCACCGTTCCTGCCTACTTCAATGACTCCCAGCGTCAGGCCACAAAAGATGCCGGAGTCATTGCCGGCCTTAATGTCATGAGGATCATTAACGAGCCTACAGCTGCAGCCATTGCATATGGACTCGACAAAAAGGCGACCAGCGTTGGCGAGAAGAATGTACTGATATTTGATCTGGGTGGAGGAACATTTGATGTCTCCCTCCTCACAATTGAGGAAGGTATTTTTGAGGTGAAGGCAACGGCCGGTGACACTCATCTTGGAGGTGAGGACTTCGACAACAGATTGGTTAACCACTTCGTTCAAGAATTCAAGAGGAAGAATAAGAAGGACATCAGTGGAAACCCGAGGGCTCTCAGGAGATTGAGGACTGCTTGTGAGAGGGCCAAGAGGACCCTTTCATCCACCGCTCAAACTACAATCGAGATTGATTCTTTGTACGAGGGAATCGATTTCTACACAACCATCACTCGTGCTAGGTTTGAGGAGCTCAACATGGACCTGTTCAGGAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGAGATGCAAAGATGGACAAAAGCAGTGTCCATGATGTTGTCCTTGTTGGTGGCTCTACGAGGATTCCTAAGGTGCAGCAGCTATTGCAGGATTTCTTCAATGGCAAGGAACTGTGCAAGAGTATCAATCCTGATGAGGCAGTTGCTTACGGGGCTGCAGTTCAAGCTGCCATATTGTGTGGTGAAGGAAATGAGAAAGTTCAGGATCTTCTGCTTCTGGATGTCACTCCTCTGTCCCTTGGTTTGGAGACTGCTGGAGGTGTGATGACAGTTTTGATCCCCAGGAATACCACCATACCCACCAAGAAGGAGCAAGTCTTCTCCACATACTCAGATAACCAACCCGGTGTTCTCATTCAGGTCTATGAGGGTGAAAGGACGAGAACCCGAGATAACAATTTGTTGGGCAAGTTCGAGCTTTCTGGCATTCCTCCAGCTCCGAGAGGTGTTCCCCAGATCAACGTTTGCTTCGACATTGATGCCAATGGTATCCTTAATGTTTCTGCAGAGGACAAGACCACCGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCGAAAGAGGAGATCGAGAAACTGGTTCAGGAAGCAGAAAAATTCAAGGCCGAGGACGAGGAACACAAGAAGAAAGTCGAATCGAAAAACACCTTGGAGAACTACGCATACAACATGAGGAACACCATCAGAGATGAGAAGATAGGCGGTAAACTTGCCCCAGCAGATAAGAAGAAGATTGAAGATGCAGTTGAACAGGCTATTCAGTGGCTGGACAGCAACCAGCTTGCCGAGTCGGATGAATTTGAAGACAAGATGAAGGAACTTGAGTCACTCTGCAACCCCATCATAGCAAAGATGTATCAAGGTGCTGGTGGCGACATGGGCGGCGCAATGGATGATGATGCTCCTCCTTCTGGCGGCAGTGGCGCTGGTCCTAAAATTGAAGAAGTTGATTAA 1947 48.74 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFAAEEISSMVLTKMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILCGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNTLENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDSNQLAESDEFEDKMKELESLCNPIIAKMYQGAGGDMGGAMDDDAPPSGGSGAGPKIEEVD 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23372273 23375287 + MC04g1562 Mch4g2139 686851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2139 648 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Mch4g2139 648 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Mch4g2139 648 FunFam Heat shock 70 kDa protein 71 126 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 209 219 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 477 493 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 36 48 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 337 353 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 396 415 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 8 21 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 146 166 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 369 389 - -
Mch4g2139 648 PRINTS 70kDa heat shock protein signature 58 66 - -
Mch4g2139 648 FunFam Heat shock 70 kDa protein 539 648 - -
Mch4g2139 648 Gene3D - 192 366 - -
Mch4g2139 648 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 622 IPR029048 -
Mch4g2139 648 FunFam Heat shock 70 kDa 391 545 - -
Mch4g2139 648 CDD HSPA1-2_6-8-like_NBD 9 386 - -
Mch4g2139 648 SUPERFAMILY Actin-like ATPase domain 198 387 IPR043129 -
Mch4g2139 648 Gene3D - 546 619 IPR029048 -
Mch4g2139 648 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Mch4g2139 648 Gene3D - 71 126 - -
Mch4g2139 648 Gene3D Actin; Chain A, domain 4 235 318 - -
Mch4g2139 648 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Mch4g2139 648 PANTHER HEAT SHOCK PROTEIN 70KDA 9 582 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Mch4g2139 648 FunFam Heat shock 70 kDa protein 197 261 - -
Mch4g2139 648 FunFam Heat shock protein 70 10 196 - -
Mch4g2139 648 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Mch4g2139 648 Coils Coil 514 541 - -
Mch4g2139 648 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mch4g2139 648 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Mch4g2139 648 FunFam Heat shock 70 kDa 235 318 - -
Mch4g2139 648 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch4g2139 648 MobiDBLite consensus disorder prediction 620 648 - -
Mch4g2139 648 Gene3D - 10 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2128 Mch-Chr4:23316148 Mch4g2139 Mch-Chr4:23372273 0 dispersed
Mch4g2139 Mch-Chr4:23372273 Mch6g0608 Mch-Chr6:4139539 0 dispersed
Mch4g2139 Mch-Chr4:23372273 Mch1g0731 Mch-Chr1:11173406 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2139 K03283 - csv:101211905 1221.45