Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2169 ATGGCTTCAAACTCCATGAATCCCTTCGTCATTCTGCTCCTCCTGGTCATCTCCTTCTCCGCCGTGGCTTCCTTTGAGTTCCAAGTCGGTGGCGCCCGGGGGTGGGTGGTGCCGCCGGCCAACGACAGCAAAATCTACAACGATTGGGCCTCAGAAAACAGGTTCCGAGGCGGCGACACCGTCCGTTTCCGGTACAAGAAGGATTCCGTGATGGAAGTAACAGAAGAAGAATACAAAAGGTGCAACTCCACACAGCCGAGCTTCTTCTCGAACACCGGCAACACGGTGTTCAATTTGGGGCGGTCGGGGACTTTCTACTTCATCAGCGGCGCCAATGGGCACTGCCAAAGAGGGCAGAGGATGATCGTGAAGGTCCTGACCGAAGACGATTCTTCCTCGAACCCTTCTCAGAAATCCTCTGCTGCGAGTGCAAGGGCTCGAATTTCTTCGCTAGGGTTTCTCAAATTTGTCTCTGCTCAGTTGGCTCTGTCGTGCTTTGCTTCGATTCTGCTTTAA 516 53.68 MASNSMNPFVILLLLVISFSAVASFEFQVGGARGWVVPPANDSKIYNDWASENRFRGGDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGNTVFNLGRSGTFYFISGANGHCQRGQRMIVKVLTEDDSSSNPSQKSSAASARARISSLGFLKFVSAQLALSCFASILL 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23524632 23526007 - MC04g1590 Mch4g2169 686881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2169 171 ProSiteProfiles Phytocyanin domain profile. 25 127 IPR003245 GO:0009055(InterPro)
Mch4g2169 171 FunFam Early nodulin-like protein 1 24 130 - -
Mch4g2169 171 Gene3D - 24 160 IPR008972 -
Mch4g2169 171 PANTHER BLUE COPPER PROTEIN 17 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Mch4g2169 171 SUPERFAMILY Cupredoxins 25 126 IPR008972 -
Mch4g2169 171 CDD OsENODL1_like 25 126 IPR041846 -
Mch4g2169 171 Pfam Plastocyanin-like domain 44 119 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1655 Mch-Chr3:18294608 Mch4g2169 Mch-Chr4:23524632 2.52E-44 dispersed
Mch4g2169 Mch-Chr4:23524632 Mch8g0503 Mch-Chr8:3563419 2.88E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2169 - - - 0.0