Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2191 ATGGGGTCCGGTAATGGGTTATGTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTCGATCCGAAGCAAATCTTTGTTGGGCCGAGGATTGGGGAGGGTGCACATGGCAAAGTGCACGAGGGGAAATACAAAGACCAAAGTGTTGCTATTAAAATAATTCGGAGAGGTGAAACCCCTGAAGAAATTGCAAAAACTGAGGCACGCTTCGCTCGGGAGGTTGCAATGTTAGCCAAAGTCCAGCACAAGAATCTTGCAAAGGTTTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGTGGTACGTTACGGAAGTACCTGTTGAGTAGGCGGCCGAGGTGCTTGGACTTGCCTGAGACAGTCGGCTTCGCACTTGATATTGCACGTGCAATGGAATGCTTGCATTCCCATGGGATCATTCATCGTGATCTCAAACCTGAGAATTTGATCTTGACCGCAGACCACAAAACCGTTAAACTTACAGACTTTGGTCTGGCTAGAGAAGAGTCAATAACAGAGATGATGACAGCTGAAACTGGGACTTACCGATGGATGGCTCCCGAGTTATACAGTACAGTCACTTTGAGAAATGGAGAGAAGAAACATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATCGTTTTCTGGGAGATTGTCCAAAATAAGTTGCCTTTTGAAGGCATGTCGAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCCAGTGCGGAGAACCTCCCTGAGGATTTAGCCCCAGTTATAACTTCCTGTTGGACCGAGGATCCGAACGCTCGGCCTAACTTCAGCCAAATCATACAAATGCTCTTGAGATATCTATCCACCATTTCATCAGAAGAGCATGTTACATCACCAAGAATGCACCCGCCGGAGAATGCAGTACTGCCACCGGAGTCTCCAGGAACAAGTTCTTTGATGGCAGCCACGAGACATGGCACCCGGGAAGTCCCAAACGACGAAATGGAAGAGAAGCCAAACAGTTTCTTCTCCTGTTTCACTGGTAACTGTTATTGA 1065 46.2 MGSGNGLCSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHEGKYKDQSVAIKIIRRGETPEEIAKTEARFAREVAMLAKVQHKNLAKVFIGACKEPIMVIVTELLLGGTLRKYLLSRRPRCLDLPETVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLTDFGLAREESITEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIVQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPEDLAPVITSCWTEDPNARPNFSQIIQMLLRYLSTISSEEHVTSPRMHPPENAVLPPESPGTSSLMAATRHGTREVPNDEMEEKPNSFFSCFTGNCY 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23652879 23656862 - MC04g1610 Mch4g2191 686903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2191 354 MobiDBLite consensus disorder prediction 298 322 - -
Mch4g2191 354 FunFam Kinase suppressor of Ras 1 14 105 - -
Mch4g2191 354 CDD STKc_MAP3K-like 31 286 - -
Mch4g2191 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 Gene3D Phosphorylase Kinase; domain 1 13 105 - -
Mch4g2191 354 PANTHER SERINE-THREONINE PROTEIN KINASE 20 287 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch4g2191 354 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Mch4g2191 354 SMART serkin_6 25 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 ProSitePatterns Protein kinases ATP-binding region signature. 31 52 IPR017441 GO:0005524(InterPro)
Mch4g2191 354 PIRSF TyrPK_CSF1-R 111 345 - -
Mch4g2191 354 PIRSF TyrPK_CSF1-R 11 125 - -
Mch4g2191 354 Gene3D Transferase(Phosphotransferase) domain 1 107 310 - -
Mch4g2191 354 ProSiteProfiles Protein kinase domain profile. 25 290 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 Pfam Protein tyrosine and serine/threonine kinase 30 286 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2191 354 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2191 Mch-Chr4:23652879 Mch5g1998 Mch-Chr5:19693486 8.26E-139 dispersed
Mch4g2191 Mch-Chr4:23652879 Mch6g0114 Mch-Chr6:665767 1.40E-146 wgd
Mch4g2191 Mch-Chr4:23652879 Mch8g1464 Mch-Chr8:10974363 6.17E-193 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77360 PF07714 PK_Tyr_Ser-Thr 6.90E-57 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2191 - - - 0.0