Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g2191 | ATGGGGTCCGGTAATGGGTTATGTTCAAAAGAGTTTGATTTGGATGCTAAGTGGCTGGTCGATCCGAAGCAAATCTTTGTTGGGCCGAGGATTGGGGAGGGTGCACATGGCAAAGTGCACGAGGGGAAATACAAAGACCAAAGTGTTGCTATTAAAATAATTCGGAGAGGTGAAACCCCTGAAGAAATTGCAAAAACTGAGGCACGCTTCGCTCGGGAGGTTGCAATGTTAGCCAAAGTCCAGCACAAGAATCTTGCAAAGGTTTTTATAGGTGCTTGCAAGGAGCCTATTATGGTGATAGTGACTGAGCTTCTTTTAGGTGGTACGTTACGGAAGTACCTGTTGAGTAGGCGGCCGAGGTGCTTGGACTTGCCTGAGACAGTCGGCTTCGCACTTGATATTGCACGTGCAATGGAATGCTTGCATTCCCATGGGATCATTCATCGTGATCTCAAACCTGAGAATTTGATCTTGACCGCAGACCACAAAACCGTTAAACTTACAGACTTTGGTCTGGCTAGAGAAGAGTCAATAACAGAGATGATGACAGCTGAAACTGGGACTTACCGATGGATGGCTCCCGAGTTATACAGTACAGTCACTTTGAGAAATGGAGAGAAGAAACATTACAATCACAAGGTGGATGTTTACAGCTTTGGAATCGTTTTCTGGGAGATTGTCCAAAATAAGTTGCCTTTTGAAGGCATGTCGAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATTTACGACCCAGTGCGGAGAACCTCCCTGAGGATTTAGCCCCAGTTATAACTTCCTGTTGGACCGAGGATCCGAACGCTCGGCCTAACTTCAGCCAAATCATACAAATGCTCTTGAGATATCTATCCACCATTTCATCAGAAGAGCATGTTACATCACCAAGAATGCACCCGCCGGAGAATGCAGTACTGCCACCGGAGTCTCCAGGAACAAGTTCTTTGATGGCAGCCACGAGACATGGCACCCGGGAAGTCCCAAACGACGAAATGGAAGAGAAGCCAAACAGTTTCTTCTCCTGTTTCACTGGTAACTGTTATTGA | 1065 | 46.2 | MGSGNGLCSKEFDLDAKWLVDPKQIFVGPRIGEGAHGKVHEGKYKDQSVAIKIIRRGETPEEIAKTEARFAREVAMLAKVQHKNLAKVFIGACKEPIMVIVTELLLGGTLRKYLLSRRPRCLDLPETVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLTDFGLAREESITEMMTAETGTYRWMAPELYSTVTLRNGEKKHYNHKVDVYSFGIVFWEIVQNKLPFEGMSNLQAAYAAAFKNLRPSAENLPEDLAPVITSCWTEDPNARPNFSQIIQMLLRYLSTISSEEHVTSPRMHPPENAVLPPESPGTSSLMAATRHGTREVPNDEMEEKPNSFFSCFTGNCY | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23652879 | 23656862 | - | MC04g1610 | Mch4g2191 | 686903 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g2191 | 354 | MobiDBLite | consensus disorder prediction | 298 | 322 | - | - | |
Mch4g2191 | 354 | FunFam | Kinase suppressor of Ras 1 | 14 | 105 | - | - | |
Mch4g2191 | 354 | CDD | STKc_MAP3K-like | 31 | 286 | - | - | |
Mch4g2191 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 105 | - | - | |
Mch4g2191 | 354 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 20 | 287 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Mch4g2191 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 314 | IPR011009 | - | |
Mch4g2191 | 354 | SMART | serkin_6 | 25 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 52 | IPR017441 | GO:0005524(InterPro) | |
Mch4g2191 | 354 | PIRSF | TyrPK_CSF1-R | 111 | 345 | - | - | |
Mch4g2191 | 354 | PIRSF | TyrPK_CSF1-R | 11 | 125 | - | - | |
Mch4g2191 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 310 | - | - | |
Mch4g2191 | 354 | ProSiteProfiles | Protein kinase domain profile. | 25 | 290 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | Pfam | Protein tyrosine and serine/threonine kinase | 30 | 286 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 257 | 279 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 214 | 236 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 102 | 115 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g2191 | 354 | PRINTS | Tyrosine kinase catalytic domain signature | 140 | 158 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g2191 | Mch-Chr4:23652879 | Mch5g1998 | Mch-Chr5:19693486 | 8.26E-139 | dispersed | |
Mch4g2191 | Mch-Chr4:23652879 | Mch6g0114 | Mch-Chr6:665767 | 1.40E-146 | wgd | |
Mch4g2191 | Mch-Chr4:23652879 | Mch8g1464 | Mch-Chr8:10974363 | 6.17E-193 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77360 | PF07714 | PK_Tyr_Ser-Thr | 6.90E-57 | CL0016 | Mch | PK |
Pathway information
