Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2219 ATGGAGAATCCTTCAGAAAAAAAATATCCATTGAATGCAAAGGATTATAACTTACATGAAGAAGTTGGTGAAGGCGTCAGTGCCACTGTGTACAAAGCACTGTGCATTCCACTAAATGAGATTGTCGCTATAAAGGTTCTTGATTTGGAGAAGTGCAACAATGACCTAGATGGTATTCGACGAGAAGTTCAAACAATGACTTTGATTGATCATCCAAATTTATTAAGAGCACATTGTTCATTCACAGCTGGCCACCACCTCTGGGTTGTGATGCCTTACATGTCTGGGGGATCTTGCCTTCATATTATGAAATCTACTTATTCTGAAGGTTTTGATGAGCCTGTCATAGCTACTTTGTTGCGCGAGGTTCTGAAAGCTCTTGTTTATCTTCATGCTCATGGCCACATTCATAGAGATGTAAAGGCTGGGAATATTTTAATTGATTCTAATGGTACGGTCAAGTTAGCTGATTTTGGAGTCTCAGCCTGCATGTTTGATACTGGAGATAGGCAACGCTCAAGAAACACATTTGTTGGAACTCCTTGCTGGATGGCACCTGAGGTTATGCAGCAATTACATGGATATGACTTCAAGGCAGACATCTGGTCATTTGGAATAACAGCACTTGAACTGGCTCATGGGCATGCTCCATTTTCAAAGTACCCACCAATGAAAGTTTTGCTAATGACATTACAAAATGCTCCTCCTGGTCTCGACTATGAAAGAGATAAGAGGTTCTCTAAGTCGTTCAAAGAAATGGTGGCTACATGCCTAGTGAAGGATCCTAAGAAACGGCCAAGTTCAGAGAAGCTCTTAAAGCACCCATTTTTTAAACAAGCCCGTTCAGTTGATTATCTTGCTCGAACAATTCTGGATGGCCTTTCTCCATTAGGGGAACGTTTTAAGAAGCTACAGGCAAAAGAAGCTGATCTTCTAGGGCAGAACAAGGCTTTGTATGGGGACAAGGAGCATTTGTCACAGCAAGAGTATATTCGAGGAATTAGTGCCTGGAACTTCAATCTTGAGGATTTAAAGAATCAGGCTGCCCTTATTCAAGATGATGATATGTCAAACATAGAAGATTTAGATGTACATACAACAAAGCAAAGAAACAAGAATAATGATTTTAGCTTTCCAGTAGAGGGTTCATCCCTTGAAAAGCCGAATCACCTAACTGCTGCAGCTAGTCAGGAGGATGGTTTCAGTGATCTTCATGATCTGGAGAGCTCCCTTGCTTCTTTCCCTATAAAACCTCTCGAAGCACTGAAAGATTGTTTTGACATCTATGAAGATATAAGCACAGACAGTGTAAGGCCAGGGGATCGAGAAAATGGAAGAACTGAGGGTGAAAGTTCAGGGCAAAGTGGTTCCTTACCACGTCATTACATGGCAGAGAATAAGAGGTCCTTCAGTGGTTCACTAATCTCTGACAATGCAGTTTCCCCTAAAAAGATTATTGTAGATGGTGATAGGGACTATCTTCAGTCAAAACTTCCAGCTGAGCGTAGTTACAGTGGTCCATTATTATATCGCCAGAAAAGAGATACAAGTAATATTTCAGCTGTCGATGATACATCAGATGGAACAGTTGTCCAACGCAAGGGGCGATTTAAAGTTACTTCGGCAGAGCTCAGTCCAAAGGGTCCTATGACGGGCTCATTTAGTCCAGTCTGCGGAGGGACGATAAGTCCGACGTCCCTGAACTTTACACCTGCTCTGCTCCTCCCACCGATGCAATGCATTTTGCAGCAGAACATCCTGCAACGGGAAGAGATCGTCAAATTGATCAAGTATTTGGAACAAATGACTGGCAAGAATCCAGATGTATCAGAGACAGTCACCAGTGAAACTCTGCAGATGCCTCCGGCTTCCTCTAGGGAAAGAGAGTTACAATCTCAGGTCGTTCATTTGCAACAGAGAATCGATAATCTTGCTGAGGAATTAGAGAAGCAGAAGTTGAAAAACGCCGAGTTTGAAAGACACATGATGCGCAATGGGTAG 2001 42.38 MENPSEKKYPLNAKDYNLHEEVGEGVSATVYKALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLIDHPNLLRAHCSFTAGHHLWVVMPYMSGGSCLHIMKSTYSEGFDEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSNGTVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVATCLVKDPKKRPSSEKLLKHPFFKQARSVDYLARTILDGLSPLGERFKKLQAKEADLLGQNKALYGDKEHLSQQEYIRGISAWNFNLEDLKNQAALIQDDDMSNIEDLDVHTTKQRNKNNDFSFPVEGSSLEKPNHLTAAASQEDGFSDLHDLESSLASFPIKPLEALKDCFDIYEDISTDSVRPGDRENGRTEGESSGQSGSLPRHYMAENKRSFSGSLISDNAVSPKKIIVDGDRDYLQSKLPAERSYSGPLLYRQKRDTSNISAVDDTSDGTVVQRKGRFKVTSAELSPKGPMTGSFSPVCGGTISPTSLNFTPALLLPPMQCILQQNILQREEIVKLIKYLEQMTGKNPDVSETVTSETLQMPPASSRERELQSQVVHLQQRIDNLAEELEKQKLKNAEFERHMMRNG 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23817061 23828591 - MC04g1638 Mch4g2219 686931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2219 666 SUPERFAMILY Protein kinase-like (PK-like) 13 300 IPR011009 -
Mch4g2219 666 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2219 666 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524(InterPro)
Mch4g2219 666 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 657 IPR047173 GO:0043539(InterPro)
Mch4g2219 666 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Mch4g2219 666 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Mch4g2219 666 MobiDBLite consensus disorder prediction 434 460 - -
Mch4g2219 666 Gene3D Transferase(Phosphotransferase) domain 1 97 315 - -
Mch4g2219 666 CDD STKc_OSR1_SPAK 14 277 - -
Mch4g2219 666 MobiDBLite consensus disorder prediction 434 448 - -
Mch4g2219 666 SMART serkin_6 16 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2219 666 Coils Coil 627 661 - -
Mch4g2219 666 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2219 666 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2219 Mch-Chr4:23817061 Mch5g0066 Mch-Chr5:447074 5.91E-107 dispersed
Mch10g1743 Mch-Chr10:17343255 Mch4g2219 Mch-Chr4:23817061 3.10E-169 transposed
Mch11g1051 Mch-Chr11:7308079 Mch4g2219 Mch-Chr4:23817061 1.50E-60 transposed
Mch8g1055 Mch-Chr8:7413828 Mch4g2219 Mch-Chr4:23817061 6.54E-186 transposed
Mch9g2066 Mch-Chr9:21755076 Mch4g2219 Mch-Chr4:23817061 1.31E-56 transposed
Mch3g1570 Mch-Chr3:17718940 Mch4g2219 Mch-Chr4:23817061 2.25E-33 transposed
Mch4g2219 Mch-Chr4:23817061 Mch8g1508 Mch-Chr8:11515694 8.58E-249 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77361 PF00069 Pkinase 1.30E-60 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2219 K08835 - csv:101205102 1260.36