Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2226 AACAGGCACAAGTGTGCAGCTTGCTTCAGGCAATTCAACAAGATAGAGCACTTGGTAGACCATATGAGAACCTCATTTCACTCAGTTCATGAACCCATTTGTGCCATTTGCAAGAAACACTGCAGATCTCTTGATTCTCTCAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAAAAACATCTTCACTACTCGAGGATGCAAATTCTGCTTGGCCATCTTGGACAGTCCTTACTCACAAAGGCTCCACCAAGAAAGATGCCAATTTTCGGGTGTAAATTCTGGGCTTCTTGCTCGTCTGGCCAACTTGGGAATTCGTGACGCTTCGATCGTCGTCGACGGCGGCAGAGCTCGAGCCACCGGCACCGTCGCATTGGCTTGCAAATATGTAGGCGGCGGCGGCGATGGGTCGCTGGACATCTGCGCCAAGGTCTGCCTTATTGATGAGACCGAAAATGTGATCTTCTATAGCTATGTCAAGCCAATCATTCCTGTCACAAATTATCGGTTTGAAACGACCGGTATTCGTCCAGAACATTTGAGAGATGCAATGCCGCTGAAGCAAGTGCAGAAGAAGATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGGTTCTTGTGGGTCACGGTGTGGAAGACGATCTCAAACGCCTCCAAATTGGATATCCAATCATAAGATTTGACATTCAAAATGGGATACAAGATCCTTATGAAGATTGTGTTGCCAGCATGAGGCTTTACAAGAGAATGAGATCACAAGTGCACAAAATAGAGGACTATCCAATGGCTTCTGACCCACAAAACAAAAATAACTTTGGAATTTGGAGGCAAAATGAGCTCGAGAGGATGACCCCAGAACACATGTTGGACATCTCCAGGTCTGATTACTATTGTTGGTGCTTGGACTTGAGGATT 924 46.0 NRHKCAACFRQFNKIEHLVDHMRTSFHSVHEPICAICKKHCRSLDSLREHLIGPLPKQECKNIFTTRGCKFCLAILDSPYSQRLHQERCQFSGVNSGLLARLANLGIRDASIVVDGGRARATGTVALACKYVGGGGDGSLDICAKVCLIDETENVIFYSYVKPIIPVTNYRFETTGIRPEHLRDAMPLKQVQKKIQEILYNGGEKARVLVGHGVEDDLKRLQIGYPIIRFDIQNGIQDPYEDCVASMRLYKRMRSQVHKIEDYPMASDPQNKNNFGIWRQNELERMTPEHMLDISRSDYYCWCLDLRI 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23871441 23873546 + MC04g1645 Mch4g2226 686938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2226 308 ProSitePatterns Zinc finger C2H2 type domain signature. 5 27 IPR013087 -
Mch4g2226 308 Pfam Exonuclease 142 232 IPR013520 -
Mch4g2226 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 3 32 IPR013087 -
Mch4g2226 308 Gene3D - 120 230 IPR036397 GO:0003676(InterPro)
Mch4g2226 308 SMART exoiiiendus 123 259 IPR013520 -
Mch4g2226 308 SUPERFAMILY Ribonuclease H-like 139 255 IPR012337 -
Mch4g2226 308 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 231 305 IPR047021 GO:0004527(PANTHER)|GO:0004527(InterPro)|GO:0005634(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2226 Mch-Chr4:23871441 Mch6g2872 Mch-Chr6:29850207 2.89E-93 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2226 - - - 0.0