Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2231 ATGGATCCGAGCTTATCCTGGGGTCATCCCAATAAGAGGGAATCATGGAGGACAATCTTCACTTTAGCTTATCAGAGCTTGGGGGTTGTTTATGGGGATTTAAGCACTTCTCCTCTGTATGTGTACAAGAGCACTTTTGCAGAGAACATTCAGCACTCGGAGACAAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTGATTCCTTTGCTTAAATATGTGTTCATGGTTCTTAGAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCTCTGCTCTGCCGCCATGCCCGGCTGAGCTCTCTCCCCAATCACCAGCTAGCAGATGAGGAGCTTTCTGCATACACAAGAGATAGGCCTGAATCAACTAATGATTTTAGTTCTGGTTCTTGTCTGAAATCAACTTTGGAGAAGTCCAAAGTTCTGCAAAGAATTTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTGATTGGGGATGGAGTGCTCACGCCAGCAATTTCAGTTTTTTCAGCTGTGTCTGGGCTTGAGTTATCCATGGCTAAGGAACATCACCAGTATATCGAAGTCCCTCTCGCGTGTGGCATATTGGTGTTCTTGTTCGCACTGCAGCATTATGGAACGCATCAGGTCGGGTTCCTGTTCGCTCCAGTTGTAATTGTATGGCTACTATGTATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCCCTAGTTTACCAAGCACTCTCCCCATACTACATGTACAAGTTCTTGAGAAAAACCCGAAAGCAAGGTTGGATGGCATTGGGCGGAATCCTCTTGTGTATAACAGGTTCTGAAGCTATGTTTGCTGATCTTGGACACTTTTCACAGTTTTCTATCAAGCTTGCTTTCACTTTTGCGGTTTATCCATCCTTAGTTCTTGCATATATGGGACAAGCTGCTTACCTTTCTAAGCATCACAATCTCGACAACGATTATCGGATCGGATTTTACGTTTCTGTTCCTGAAAAGGTAAGATGGCCAGTTCTTGCAATAGCAATACTTGCAGCTGTGGTAGGCAGTCAAGCCATCATCACTGGCACGTTTTCGATAATCAAACAGTGTTCTGCTTTGGGCTGTTTCCCAAGGGTAAAGATCATTCATACATCGTCGAAAATACACGGCCAAATTTACATTCCGCTGATCAATTGGATACTAATGATATTATGTTTGGCGGTTACTATCGGGTTTAGAGACACGAAACGCTTGGGTAATGCAGCAGGGTTAGCAGTAATAACCGTTATGCTCGTCTCAACTTGTCTGATGTCTCTTGTTATTGTGTTATGCTGGCGTAAAAGTGTGTTGTTGGCTGTAGCCTTCATACTCTTCTTTGGCTCCATAGAAGCTTTGTACTTCTCTGCATCTCTTATCAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCTCTTTCACTAACTTTCCTTATGGTTATGTATGTTTGGCACTATGGAACTTTGAAGAAATATGAGGCAGATGTTGAAAACAAAGTTCCTATAAATTGGCTTCTTAGTATAGGACCCAAAATTGGGATCGTTCGGGTTCGAGGGATCGGCCTTGTACATACCGAACTCGTTTCGGGGATCCCTGCCATTTTCTCTCACTTTGTCACCAACCTTCCCGCCTTTCACCAAATTCTAGTCTTTCTTTGCATCAAATCTGTCACAATGCCTCATGTGAGACCTGAGGAAAGATTTCTAGTTGGAAGAGTTGGGCCAAAGGAGTATCGACTCTACCGTTGCATCGTACGATACGGCTATCGTGATGTTCACAAGGACGACTTGGAGTTCGAGAGAGATCTTGTTTGTAGTATTGCAGAGTTCATAAGGTCGGAAAGAACGGAATGCAACACTTTCAGACATGAGGACTTGGACGACAATGAAAGAATGACAGTGATTGGAACCTCATCAACCCAACTAGACGGCATACGAATGTGCGAAAACGAAACGTACTCTTCGCCAATCATAGGGACTTCAGAGATAAAGTCAGAGAAGTTGAGGAAAAGAGTGAGATTCGTTCTCCCAGAGAGTCCGAAAATGGATATCGATACGAGGGGAGAGTTGCAAGAGTTGATGGAAGCTCGAGAGGCCGGAATAGCATTCATAATGGGACACTCATATGTGAAGGCAAAAAAGGGATCAGGTTGGATGAAGAAGCTTGTGATTAATTATGGGTATGATTTCTTGAGGAAAAATTCAAGAGGGCCATCTTATGCTTTGAGCATCCCTTATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTCTAA 2316 43.39 MDPSLSWGHPNKRESWRTIFTLAYQSLGVVYGDLSTSPLYVYKSTFAENIQHSETNEEVYGVLCFVFWTLTLIPLLKYVFMVLRADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYTRDRPESTNDFSSGSCLKSTLEKSKVLQRILLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHQYIEVPLACGILVFLFALQHYGTHQVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYQALSPYYMYKFLRKTRKQGWMALGGILLCITGSEAMFADLGHFSQFSIKLAFTFAVYPSLVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPEKVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKIHGQIYIPLINWILMILCLAVTIGFRDTKRLGNAAGLAVITVMLVSTCLMSLVIVLCWRKSVLLAVAFILFFGSIEALYFSASLIKFFEGAWVPIALSLTFLMVMYVWHYGTLKKYEADVENKVPINWLLSIGPKIGIVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKSVTMPHVRPEERFLVGRVGPKEYRLYRCIVRYGYRDVHKDDLEFERDLVCSIAEFIRSERTECNTFRHEDLDDNERMTVIGTSSTQLDGIRMCENETYSSPIIGTSEIKSEKLRKRVRFVLPESPKMDIDTRGELQELMEAREAGIAFIMGHSYVKAKKGSGWMKKLVINYGYDFLRKNSRGPSYALSIPYASTLEVGMVYYV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23901843 23905796 + MC04g1650 Mch4g2231 686943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2231 771 NCBIfam potassium uptake protein 22 771 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch4g2231 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 771 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Mch4g2231 771 Pfam K+ potassium transporter C-terminal domain 532 769 IPR053952 -
Mch4g2231 771 Pfam K+ potassium transporter integral membrane domain 22 519 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2231 Mch-Chr4:23901843 Mch8g0003 Mch-Chr8:16589 0 dispersed
Mch8g1338 Mch-Chr8:9828015 Mch4g2231 Mch-Chr4:23901843 0.00E+00 transposed
Mch4g2231 Mch-Chr4:23901843 Mch8g1541 Mch-Chr8:12004197 0 wgd
Mch4g2231 Mch-Chr4:23901843 Mch9g2225 Mch-Chr9:22729277 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2231 K03549 - csv:101218141 1458.35