Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2238 ATGGCGGGAAGATATTTGGTGGACGGCGTTCTGCCATTTCCGGCGATGGTAACGATGGAGTGCATCAACGTCGGTTTAAACACTCTTTTCAAAGCCGCCACCGCCGCCGGCATGAGCCGCCACGTCTTCATCGTCTATTCTTACTCCGTCGCCGCCCTCCTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCAACACGACTTCCACCGCTCAATTTCTCCATACTCTCCAAAATCGCTCTTCTCGGAATCATCGGGTCTTCTTCACAGATAATGGGATACACGGGTATCAATTACAGTTCTCCGACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATCCTCGCCATCATTTTCAGGATGGAGAAAGTGGTATTGAAAAGCAGTAGCAGTCAAGCAAAAGTGATGGGCACCATAATATCAATATCAGGTGCATTTGTAGTCACTCTTTACAAGGGTCCAAGCATCATATTCTCTTCAACAACCACAACCACAACATCTCTTTCACTTAACTCCTCACCCTCAGATTCTAATTGGGTCCTTGGCAGCCTTCTCTTGACTGCTGAATATATCTTGGTTCCACTCTGGTACATTGTTCAGACAAAAATCATGAAGGAATATCCAGAGGAGGCCACAGTGATCTTCTTCTACAACTTAACTGTGGCCATCATTGCTGCACTTGTAGGTGTGATTTTAGAGAAGGATTCAAGTGCTTGGCTTTTGAGGCAAAATACAGCATTGGCCTCTGTTTTGTGCTCTGGAGTTTTTGGGTCATGCATAAATAATACAGTTCATACATGGGCACTCCGCTTGAAAGGGCCGGTGTTCGTAGCGATGTTTAAGCCGTTGTCGATTGTTGTTGCTATTGTAATGGGCGTTCTGTTTCTTGGTGATTCTCTCTATCTTGGAAGTCTTATTGGAGCATCCATTATTTCCATAGGGTTTTATACTGTGATGTGGGGAAAAGCAAAAGAAGAGGAGATGGGTGATGAAGAAGGCCATACCCATAATCTCACTGCTAACATGGAATCACATGAAGACCAGAAAGTACCTCTTCTTGGTACCTATAAGACACAGAGATACAGTTCAGATCATGTGTGA 1113 45.28 MAGRYLVDGVLPFPAMVTMECINVGLNTLFKAATAAGMSRHVFIVYSYSVAALLLLPSPFISRRSTRLPPLNFSILSKIALLGIIGSSSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVLKSSSSQAKVMGTIISISGAFVVTLYKGPSIIFSSTTTTTTSLSLNSSPSDSNWVLGSLLLTAEYILVPLWYIVQTKIMKEYPEEATVIFFYNLTVAIIAALVGVILEKDSSAWLLRQNTALASVLCSGVFGSCINNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKAKEEEMGDEEGHTHNLTANMESHEDQKVPLLGTYKTQRYSSDHV 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23942980 23947273 + MC04g_new0586 Mch4g2238 686950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2238 370 Pfam EamA-like transporter family 199 323 IPR000620 GO:0016020(InterPro)
Mch4g2238 370 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020(InterPro)
Mch4g2238 370 PANTHER WAT1-RELATED PROTEIN 15 338 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch4g2238 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 328 - -
Mch4g2238 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2238 Mch-Chr4:23942980 Mch8g1547 Mch-Chr8:12071984 9.95E-106 dispersed
Mch4g2237 Mch-Chr4:23936295 Mch4g2238 Mch-Chr4:23942980 2.11E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2238 - - - 0.0