Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2242 TTTTGGATCCGAACCCAGATGGCTCCGAGCTCTGTTGTGGTCACAATTGAGAAGCACAACAGCTTCCCTCTTGTGGAAATCAATGCCTCTGATTCGTTGTTACTTCCCGAGAAGCAGAAGGCTGCCAGTCCGAAACAGCTCACGTGGGTTCTTCTTCTCAAAGCCCACAGAGCTCTGTTTTTCTTCTCGTGGATGGCTTTAACTGTCAAGACTGTGTTTACTTCTGTTAAGAAACGCATTGCTCATGCGGACATTAACGGGGAAAATTCCAAAAACCGAGGGAAATTGTACAGATTCATCATAGCCTTTCTCGCCATTTCCATCGCGGCTTTAATCGTTGAAATCGTCGCCCATTTCAAGAAGTGGAATCTGCGAGTGATTCAGCCATTGGAGCTCGAGGTTCAAGGACTCGTCCAATGGTTTTACGTCTCCTGGACTTCGTTCCGAGTCGATTACATTGCTCCACTGGTACTTATGCTTTCCAAATTCTGCATTGTTCTGTTCTTGATCCAATCTCTCGACCGTCTTGTTCTCTGCCTTGGCTGCTTCTGGATCAAATTCAAGAAAATCAAACCCACGATTCAGGAAGATGCTTATGATTTGGAAGACGCTTCGACTTTCCCGATGGTTCTTGTTCAAATCCCAATGTGCAATGAGAGAGAGGTTTATGCACAATCGATTGCTGCTGCTTGTCAGCTTGATTGGCCGAGGAATCGGATTTTGATTCAAGTTCTGGATGATTCAGACGACGGAAATCTTCAACGTTTGATCAAAGAAGAAGTTCTATCATGGAATGAGAAGGGTGTTAAAATAATTTATAGACATAGATTGATCCGAACTGGGTATAAAGCTGGGAATCTCAAGTCTGCCATGGCTTGTGATTATGTTAAAGATTACGAGTTTGTAGCTATTTTAGATGCAGATTTCCAGCCCAACCCTGATTTCCTTAAACAAACGATCCCCCATTTCAAGGGAAATCCTCAGCTGGGTCTCGTCCAAGCTCGGTGGGCGTTCGTTAACAAGGACGAAAACTTACTTACGAGGCTCCAAAACATCAACTTGTGTTTCCACTTTGAAGTGGAACAGCAAGTAAATGGGGTTTTCCTGAACTTCTTTGGATTCAATGGAACCGCAGGCGTCTGGAGAGCAAAAGCACTTGAGGAATCAGGTGGCTGGCTCGAGCGAACAACCGTGGAAGATATGGATATTGCAGTTCGAGCACACTTGAAGGGATGGAAATTCATCTTCCTCAATGATGTTAAGGTGCTCTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCAATGCAGCTCTTCAGATTATGCCTTCCTTCAATCATTACTTCAAAGATATCAATATGGAAGAAGACCAACTTGATATTTCTGTTCTTTCTGCTGAGAAAACTCATACTTCCCTTTTACTCATTCACTTTGTTTTGCATAATACTTCCATTGACAATGTTCATTCCAGAAGCAGAATTGCCTCTCTGGGTAATCTGCTACATCCCAGTCTTCATGTCCTTACTAAACATTCTTCCATCCCCAAAATCCTTCCCCTTCTTGATCCCCTACCTCTTGTTTGAGAACACCATGTCGGTCACGAAGTTCAACGCCATGGTTTCGGGGCTATTCCAGCTCGGAAGTTCCTACGAATGGGTCGTGACAAAGAAGACAGGACGATCATCCGAATCAGACTTCTTAGCACTCGCAGAGCGAGAGTCGAAATATTCGAACGAGGAGAAGATTCTGAGGAGGCATTCGGAGTCGGGGCTCGAGTTGTTGAGCAAACTGAATCAAGAAGAGACGCAAAAGGGTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTTGCTCTTGCTTTTCTGCTGCTCACTGCAGCTGCTAGAAGCTTGCTGTCAGCACATGGAGTTCACTTCTATTTCTTGCTTTTCCAAGGTTTGTCATTCCTGGTGATGGGGTTGGACTTGATTGGTGAGCAAATGAACTGA 2019 44.33 FWIRTQMAPSSVVVTIEKHNSFPLVEINASDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWMALTVKTVFTSVKKRIAHADINGENSKNRGKLYRFIIAFLAISIAALIVEIVAHFKKWNLRVIQPLELEVQGLVQWFYVSWTSFRVDYIAPLVLMLSKFCIVLFLIQSLDRLVLCLGCFWIKFKKIKPTIQEDAYDLEDASTFPMVLVQIPMCNEREVYAQSIAAACQLDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVKIIYRHRLIRTGYKAGNLKSAMACDYVKDYEFVAILDADFQPNPDFLKQTIPHFKGNPQLGLVQARWAFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRAKALEESGGWLERTTVEDMDIAVRAHLKGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKTGRSSESDFLALAERESKYSNEEKILRRHSESGLELLSKLNQEETQKGSKKKRNKVYRKELALAFLLLTAAARSLLSAHGVHFYFLLFQGLSFLVMGLDLIGEQMN 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23956344 23959009 - MC04g1655 Mch4g2242 686954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2242 672 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 200 427 IPR029044 -
Mch4g2242 672 SUPERFAMILY Nucleotide-diphospho-sugar transferases 210 510 IPR029044 -
Mch4g2242 672 FunFam probable xyloglucan glycosyltransferase 5 202 426 - -
Mch4g2242 672 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 125 671 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Mch4g2242 672 Pfam Glycosyl transferase family group 2 302 508 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0635 Mch-Chr11:4093054 Mch4g2242 Mch-Chr4:23956344 0 dispersed
Mch4g2242 Mch-Chr4:23956344 Mch8g0605 Mch-Chr8:4329710 4.14E-302 dispersed
Mch4g2242 Mch-Chr4:23956344 Mch11g0387 Mch-Chr11:2422199 4.95E-303 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2242 K20887 - csv:101208151 1206.82