Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2352 TGGATCCAGCTCCCCCTCATGCCTCCACCGCCGAATGCCGACGACGCCGCCGTCGAATGCTACGCCTGTACTCAGGCCGGCGTTCCCGCGTTCCACTCCACGAGCTGCGGCCAGTGGGAGGCCTCCGCCGGCTCCTCCCTCGTCCCCATCCAATTTCGCCCCACACAGACCAATCCCCCCTCGGGTCGATTCGGGGGCGTTCTCGACCCGAGGACCAAGCGGGTCCAGACATGGAATCGCGCTCTCCTCCTCGCACGTGGCATCGCCCTCGCGGTTGATCCCCTCTACCTCTACGCCCTCTCCATCGGGAGAGGCGGCTCGCCCTGCCTCTACATGGACGGCGGGTTGGCCGCCGTCGTCACCGCTGTCCGTACGTGCGTGGATGTGCTCCACCTGTGGCACGTGTGGCTGCAGTTCCGGCTCGCCTACGTGTCCAGGGAGAGCATGGTGATTGGCTGCGGCAAACTCGTGTGGGACGCACGTGCCATCGCTTCCCATTACGTCCGCTCCTTCAAGGGCTTCTGGCTCGATGCCTTCGTCATTCTCCCAATCCCTCAGATTGTTTATTGGTTGGTTTTACCAAAACTGATCAGAGAAGAGAAAATCAAAGTTATAATGACAGTAATCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTCTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGTTACATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATCTCATTGCCTATTTCATTGCCTCTCATGTCGCTGGGGGCTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAGCATTGTGAGAGGAACAAGTGCAACCTATCTCTGTCTTGCTCCGAGGAGGTCTGTTATCAGTTTCTTGCAACGGCTACGACAGTTGGAAATCCGTGTGGTCGACATTCGACCGCAACATTTAGGAAGGCGTTATGCTTGGATGTTAATGGTCCGTTCCGCTATGGTATCTACAAGTGGGCTCTTCCAGTCATTTCTAGCAATTCGGTTGCAGTCAAAATCCTTTATCCCATCTTTTGGGGCTTAATGACTCTTAGCACCTTTGGCAATGATCTGGAGCCGACGAGTCAGTGGCTAGAAGTATGCTTCAGTATCTGCACGGTGCTCAGTGGATTGCTGCTTTTCACTCTTTTGATTGGTAATATCCAGGTACTTTTGCACGCCGTCATGGCGAGGAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGACACCGAGTTCGACACTACGAACACCAGCGATGGGCAACCATGGGTGGAGAAGATGAGATGGAACTAATCAAAGACTTGCCTGAAGGTCTTAGAAGAGACATTAAGCGCCATCTTTGTGTTGATCTTATCAGAAAGGTACCTCTGTTCCAAAACCTGGATGAGCTTATTCTCGACAACATCTGTGATCGAGTCAAGCCACTTGTATTCTCCAAAGATGAAAAGATTATTAGAGAAGGAGATCCTGTTCCAAGGATGTTGTTCATAGTGCGTGGATGTGTAAAGAGTAGCCAAAGCCTGAGCAAGGGCATGACAGCGACAAGCTTGATCGAACCGGGAGGGTTTCTTGGTGACGAGCTGCTATCGTGGTGTCTTCGACGCCCGTTTCTCGAGAGGCTTCCAGCTTCATCAGCGACATTTGTTTGCATCGAACCAACAGAAGCATTTGCCCTGAATGCAGACCATTTGAAATACATAACCGATCACTTCCGCTACAAGTTCGCCAACGAGAGACTTAAGAGAACGGCGAGATATTACTCTTCCAACTGGAGAACATGGGCGGCCGTGAACATACAATTTGCCTGGCGTCACTACAGAAAGAGGACGAGACGTCCAGTGATTGCTGTGGTGGAAAACGGAAGCCATGAACGTCGACTTTTGCGGTATGCTGCAATGTTCATGTCGTTCAGACCACACGACCATCTTGAA 2007 51.62 WIQLPLMPPPPNADDAAVECYACTQAGVPAFHSTSCGQWEASAGSSLVPIQFRPTQTNPPSGRFGGVLDPRTKRVQTWNRALLLARGIALAVDPLYLYALSIGRGGSPCLYMDGGLAAVVTAVRTCVDVLHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWLDAFVILPIPQIVYWLVLPKLIREEKIKVIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLATATTVGNPCGRHSTATFRKALCLDVNGPFRYGIYKWALPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSQWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRHRVRHYEHQRWATMGGEDEMELIKDLPEGLRRDIKRHLCVDLIRKVPLFQNLDELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVRGCVKSSQSLSKGMTATSLIEPGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEAFALNADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRHYRKRTRRPVIAVVENGSHERRLLRYAAMFMSFRPHDHLE 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24784532 24787699 - MC04g1731 Mch4g2352 687064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2352 669 Pfam Cyclic nucleotide-binding domain 502 591 IPR000595 -
Mch4g2352 669 SMART cnmp_10 482 608 IPR000595 -
Mch4g2352 669 SUPERFAMILY Voltage-gated potassium channels 70 403 - -
Mch4g2352 669 Gene3D Jelly Rolls 480 598 IPR014710 -
Mch4g2352 669 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 65 636 - -
Mch4g2352 669 Gene3D - 112 406 - -
Mch4g2352 669 CDD CAP_ED 482 592 IPR000595 -
Mch4g2352 669 SUPERFAMILY cAMP-binding domain-like 409 596 IPR018490 -
Mch4g2352 669 Gene3D Helix hairpin bin 408 473 - -
Mch4g2352 669 ProSiteProfiles cAMP/cGMP binding motif profile. 482 561 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0292 Mch-Chr10:1918850 Mch4g2352 Mch-Chr4:24784532 2.90E-267 dispersed
Mch10g1135 Mch-Chr10:8508111 Mch4g2352 Mch-Chr4:24784532 1.01E-218 dispersed
Mch4g2352 Mch-Chr4:24784532 Mch6g0569 Mch-Chr6:3847913 8.86E-122 dispersed
Mch4g2352 Mch-Chr4:24784532 Mch8g1531 Mch-Chr8:11952081 3.21E-121 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2352 K05391 - csv:101203560 1206.05