Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2377 CTCTTTATTTATCAAGCCCGTACATCTTGCAGGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCAGGTCTCTTTACTGGGGTTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTTAAGGACTCTGCCGAGAAAAATGCATTTTCTGTTGTCAAAGGCTTACTGAAGAATGATGGGATTCCTGGTCTTTACAGAGGGTTTGGTACAGTAATCACTGGTGCAATTCCTGCAAGGATCATCTTTCTTACCGCTTTGGAGACAACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCACTTAAATTCTCTGAACCCGTTCAGGCCGCAATAGCAAATGGATTAGCTGGCATGACGGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGACGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCAGGCCACACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTAATAAAATCTGATGGAATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGTTCGTAGGCCAAAACTCTGCTCCCGAGGAATTTGCTCCTAGCCATGCCAAAATTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTACTTATTGCCCTAGTTGATGTCAAACCATCCTTCTCATCAAGACAAATTGTTGAAAGCTTAATCGCTGAGGAAGGATGGAAAGGTTTCTATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCGGCCTGGGGAACCTCAATGATATTGACTTACGAGTACCTGAGTATGGACTTCTCACTATATTTCCTGCACTGT 954 43.5 LFIYQARTSCRLDKAKFYGVGAGLFTGVTVALYPVSVVKTRMQVAVKDSAEKNAFSVVKGLLKNDGIPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPLKFSEPVQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGHTRYNGGLDVARKLIKSDGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFVGQNSAPEEFAPSHAKIISVQAAGGIIAGATASCITTPLDTIKTRLQVLIALVDVKPSFSSRQIVESLIAEEGWKGFYRGLGPRFFSMSAWGTSMILTYEYLSMDFSLYFLHC 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24922215 24924761 - MC04g1754 Mch4g2377 687089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2377 318 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085(InterPro)
Mch4g2377 318 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085(InterPro)
Mch4g2377 318 PRINTS Mitochondrial carrier protein signature 30 44 IPR002067 GO:0055085(InterPro)
Mch4g2377 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 310 IPR018108 -
Mch4g2377 318 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 308 - -
Mch4g2377 318 SUPERFAMILY Mitochondrial carrier 13 307 IPR023395 -
Mch4g2377 318 FunFam Mitochondrial substrate carrier family protein 18 311 - -
Mch4g2377 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Mch4g2377 318 Pfam Mitochondrial carrier protein 22 97 IPR018108 -
Mch4g2377 318 Pfam Mitochondrial carrier protein 226 307 IPR018108 -
Mch4g2377 318 Pfam Mitochondrial carrier protein 116 202 IPR018108 -
Mch4g2377 318 Gene3D Mitochondrial carrier domain 17 313 IPR023395 -
Mch4g2377 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 98 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0440 Mch-Chr11:2762416 Mch4g2377 Mch-Chr4:24922215 3.73E-78 dispersed
Mch4g2377 Mch-Chr4:24922215 Mch5g0794 Mch-Chr5:5528747 6.45E-92 dispersed
Mch4g2377 Mch-Chr4:24922215 Mch9g0233 Mch-Chr9:1742166 1.60E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2377 K15121 - csv:101206140 510.76