Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2421 ATGGCTTCACCTTCTCCAAGTATTTCTCCTCCGGAGAATCCACCGGATTCGACAGTTTTTTCTCCACCTTCTCCCTCTCCTCCGGCGGAGTCTTCACTCACTCCCTCATCTCCTACATCTTCTGAGCCTAATCAGAATGCTGAACCTCCTTCAACACCTTCTAATCCTTCAGCCCCATCTCCTCAGTCACCACCAGCAGTTCCCGATGCTCCTCCTCTTGCTCCTCCACTCTCTCCTCCACCATTGACCTCATCACCACCTGCACCACCAGCATCCTCCCCTCCTCCCCCAGCTGCTATCCCACCTTCGCCTCCGCCTCCTTCAACATCATCCTCTCCGCCACCACCTTCAACGACATCACCACCTCCTCCAGAGCAATCCACTGCCCCTCCTCCTCCTGAAGCTTCACCTCCCCCTCCTGATCTATCAACACCACCACCACGAGCAGATGGTTCTCCACCTCCTCAATCCCATCCTAGACCTCCATCTTCAACTCCCTCTCCCCCTCCCCCTGATACAATTTCACCTTCTCCACCGCCACCAGCTAACGTCCCAACACCACCTTCACCAACAGGTGAATCACCTAAACTATCTCCTCCATCCCCCAAGCTTTCTCCTCCTTCTCCTTCTCAGTCTCCACCTTCAGTTGATGCCCCTCCACCAAGATCCACATTACCATCACCTTCTCCTCCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTACTGTTCCTGGATCTCCAACTAATTCATCTGGTGAAAGTCCTACTACTCCTACAACATCTCCTATTATACCAGATAGACCAATTGCAACAAGCAATGGTACCAATGTTACAGCAAATGGCTCAACCACAGCCACAGCTAAAGGGGGTTTAAGCACTGAAACATCTGTGGCAGTTGGCAGCGTGATTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCCATGTGGTTTGTTCAGAAACGAAAGAGAAGAAAGAAGAATATCCCCTACACCATGCCTTCTCCTTTTTCCTCCCAAAACTCAGATTCCCTTTTCTTAAGGCCCCCTTTTTCAGCCCCTATGGTAGGAAGTCGTACTGATAGTGATTTCAAGTATTCATCATCAGATGGAGGTGGAGTAGGTAATTCAAGATGGTTTACTTATGAAGAGCTAGTCCAGGCAACAGGTGGGTTTTCGTCGAAGAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAAAGGCACCCTTGCAGATGGAAGGGACGTAGCTGTTAAACAACTTAAAGTTGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCAGAAGTTGAGATTATTAGCCGAGTACATCATCGACATCTGGTTTCCCTGGTCGGTTTTTGTATCTCCGATCATCAAAGATTGCTTGTCTACGATTATGTTCCAAACAATACCCTTCATTACCATCTGCACAGTGAGAACAGGCCAGTTTTGGCTTGGGCCACACGTGTTCAAATTGCTGCTGGTGCTGCCCGTGGAATTGCTTACCTTCATGAAGATTGCCATCCGCGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTCGATATCAACTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCTAAATTAGCATTGGATTCACATACACATGTAACAACCCGTGTTATGGGAACTTTTGGATACATGGCTCCAGAATATGCAACAAGTGGGAAATTGACGGATAAATCTGATGTTTTCTCCTATGGGGTTGTTCTTTTGGAGCTAATTACTGGTCGCAAGCCTGTCGATTCTTCTCAGCCTCTAGGGGATGAGAGCTTAGTTGAATGGGCTCGACCGTTGCTTGCACAAGCCCTTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTGGACAACAATTATGTCGACCGAGAAATGTTTCGGATGATTGAAGCAGCCGCTGCTTGCGTTCGTCATTCAGCCGTAAAAAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGATTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAAAGTGGAGTGCTTGACTCAGCAGAACATTCTGCCCAGATCAGACTATTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTCTTGCGTACTCCGATCGAGATCGAAGTCGAAGTCGAAGTCAGAGTCAAAGTAGTTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCGCCCATTAACCCATCTCGGCAATGGAACATCTAA 2247 48.11 MASPSPSISPPENPPDSTVFSPPSPSPPAESSLTPSSPTSSEPNQNAEPPSTPSNPSAPSPQSPPAVPDAPPLAPPLSPPPLTSSPPAPPASSPPPPAAIPPSPPPPSTSSSPPPPSTTSPPPPEQSTAPPPPEASPPPPDLSTPPPRADGSPPPQSHPRPPSSTPSPPPPDTISPSPPPPANVPTPPSPTGESPKLSPPSPKLSPPSPSQSPPSVDAPPPRSTLPSPSPPVPSSSAPPPVTVPGSPTNSSGESPTTPTTSPIIPDRPIATSNGTNVTANGSTTATAKGGLSTETSVAVGSVIGVLVLSLVIMAMWFVQKRKRRKKNIPYTMPSPFSSQNSDSLFLRPPFSAPMVGSRTDSDFKYSSSDGGGVGNSRWFTYEELVQATGGFSSKNLLGEGGFGCVYKGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGFCISDHQRLLVYDYVPNNTLHYHLHSENRPVLAWATRVQIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSYGVVLLELITGRKPVDSSQPLGDESLVEWARPLLAQALEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVLDSAEHSAQIRLFQRMAFGSQDYSLAYSDRDRSRSRSQSQSSWSRESRDQSPSAPINPSRQWNI 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25193825 25200739 + MC04g1786 Mch4g2421 687133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2421 748 MobiDBLite consensus disorder prediction 246 288 - -
Mch4g2421 748 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 274 700 IPR047117 -
Mch4g2421 748 ProSiteProfiles Protein kinase domain profile. 391 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2421 748 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524(InterPro)
Mch4g2421 748 MobiDBLite consensus disorder prediction 49 245 - -
Mch4g2421 748 MobiDBLite consensus disorder prediction 33 48 - -
Mch4g2421 748 Gene3D Phosphorylase Kinase; domain 1 363 466 - -
Mch4g2421 748 FunFam proline-rich receptor-like protein kinase PERK8 467 679 - -
Mch4g2421 748 MobiDBLite consensus disorder prediction 711 748 - -
Mch4g2421 748 SUPERFAMILY Protein kinase-like (PK-like) 373 664 IPR011009 -
Mch4g2421 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2421 748 FunFam Proline-rich receptor-like protein kinase PERK8 364 466 - -
Mch4g2421 748 MobiDBLite consensus disorder prediction 721 748 - -
Mch4g2421 748 SMART serkin_6 391 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g2421 748 Pfam Protein tyrosine and serine/threonine kinase 394 664 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g2421 748 CDD STKc_IRAK 397 667 - -
Mch4g2421 748 MobiDBLite consensus disorder prediction 1 32 - -
Mch4g2421 748 MobiDBLite consensus disorder prediction 1 288 - -
Mch4g2421 748 Gene3D Transferase(Phosphotransferase) domain 1 467 679 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0343 Mch-Chr2:2539117 Mch4g2421 Mch-Chr4:25193825 4.97E-70 dispersed
Mch4g2421 Mch-Chr4:25193825 Mch8g3147 Mch-Chr8:33763076 1.08E-150 dispersed
Mch9g2331 Mch-Chr9:23373781 Mch4g2421 Mch-Chr4:25193825 1.06E-74 dispersed
Mch2g0215 Mch-Chr2:1636943 Mch4g2421 Mch-Chr4:25193825 2.32E-35 transposed
Mch4g0260 Mch-Chr4:1693563 Mch4g2421 Mch-Chr4:25193825 1.18E-71 transposed
Mch8g0251 Mch-Chr8:1670203 Mch4g2421 Mch-Chr4:25193825 2.71E-32 transposed
Mch9g2244 Mch-Chr9:22849797 Mch4g2421 Mch-Chr4:25193825 4.73E-169 transposed
Mch4g2421 Mch-Chr4:25193825 Mch8g2398 Mch-Chr8:27056801 1.98E-61 wgd
Mch4g2421 Mch-Chr4:25193825 Mch9g2017 Mch-Chr9:21439862 5.38E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77372 PF07714 PK_Tyr_Ser-Thr 1.00E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2421 - - - 0.0