Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch4g2425 | ATGGCGGTTCCCGTGGTTCAATTCCCGATCTTTATGGCTGTGAGAGTGCTCGGGATGATTGTGGCAACTCTTGTGATCATTTGGACCTCGCACTTCCGTGGAGGATTGGCACTTATCTCAGACAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTAATGGTGATTGGACTCGTACTTCTAAATGGTGAAGCAATGTTAGCATACAAGACAGCTTCAGGAACCAAAAACTTCAGAAAACTAGTTCATCTCTCACTACAGTTTGTTGCATTCTGTTTGAGCCTGATTGGTGTATGGGCTGCCCTGAAGTTCCACAACGACAAAGGAATCGACAACTTTTACAGTCTGCATTCATGGTTGGGCCTACTTTCCGTCTTCCTCTTTGGCATCCAGTGGACTGCAGGATTCGTAACTTTCTGGTACCCAGGTGGCTCCAGAAACAGCAGAGCTACTCTGTTGCCATGGCATGTTTTCTTTGGCGTTTATACATATGGCCTTTCTATTGCCACAGCTGCCACTGGATTGTTAGAAAAAGCCACATTCCTTCAAACCAGCAAGGTAATATTACGCTATTCGAATGAGGCTTTGCTAATAAATTCATTGGGTATCCTTCTTGTTCTTCTCGGGGGTCTTGTAATTCTTGCGGTTATAGCTCCGCCCAACGGCAAAGGCGAGATTTTAAGAGGGCCTGCAGAATAG | 699 | 45.49 | MAVPVVQFPIFMAVRVLGMIVATLVIIWTSHFRGGLALISDNKDLIFNVHPVLMVIGLVLLNGEAMLAYKTASGTKNFRKLVHLSLQFVAFCLSLIGVWAALKFHNDKGIDNFYSLHSWLGLLSVFLFGIQWTAGFVTFWYPGGSRNSRATLLPWHVFFGVYTYGLSIATAATGLLEKATFLQTSKVILRYSNEALLINSLGILLVLLGGLVILAVIAPPNGKGEILRGPAE | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 25229350 | 25232356 | + | MC04g1790 | Mch4g2425 | 687137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch4g2425 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Mch4g2425 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Mch4g2425 | 232 | Gene3D | - | 1 | 229 | - | - | |
| Mch4g2425 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Mch4g2425 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Mch4g2425 | 232 | CDD | Cyt_b561_ACYB-1_like | 40 | 183 | - | - | |
| Mch4g2425 | 232 | PANTHER | CYTOCHROME B561-RELATED | 1 | 221 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch4g1472 | Mch-Chr4:18201696 | Mch4g2425 | Mch-Chr4:25229350 | 4.42E-51 | transposed | |
| Mch6g2469 | Mch-Chr6:26588270 | Mch4g2425 | Mch-Chr4:25229350 | 1.70E-71 | transposed | |
| Mch9g1251 | Mch-Chr9:14298809 | Mch4g2425 | Mch-Chr4:25229350 | 2.09E-58 | transposed | |
| Mch4g2425 | Mch-Chr4:25229350 | Mch9g1999 | Mch-Chr9:21299990 | 2.26E-60 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch4g2425 | K08360 | - | csv:101212633 | 389.037 |