Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2472 AAGAAGATGAAGAGAGAAACAGAAGTTTTATGCAGTGGTAATAACTATAGGCATATTTTGAGCAGTAATGGAGGAAGGCTGAATACAATAACGCCATGCGCAGCTTGTAAGCTTCTGAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAATGTCGCTAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCCGACGCGGCAAACAGCCTGGTTTATGAAGCCAATCTGAGGCTGAGAGATCCAGTCTACGGCTGCATGGGCGCCATTTCAGCTCTTCAGCACCAACTCCAAACTTTACAAGCTGACCTCAATTCGATAAGATCTGAGATTTTGAAGTACAAGTATAGAGATGCTATTATTCCCTCTTCTTCTTCCTCTCCACACATCGCTTTGATTTCGGGCGCCGCCGGAGTCGTCGTTTCCACCACCGCAACCCCGCCTGCAGCACCCCCGACTCCCCCACATTCTCAGCCGCCTCCACTTTCTCTTCCGCCGCCTCCTCCGTCCTCCTCCGCGATCTATTCCTCGCCAATCAGTAGTGCTGCCCCTGAATTTAACACCATCTCGGCTGAACATATTTCCTACTTT 654 48.78 KKMKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25556187 25557753 + MC04g1831 Mch4g2472 687184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2472 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 30 157 - -
Mch4g2472 218 MobiDBLite consensus disorder prediction 165 198 - -
Mch4g2472 218 Pfam Lateral organ boundaries (LOB) domain 32 128 IPR004883 -
Mch4g2472 218 Coils Coil 111 131 - -
Mch4g2472 218 ProSiteProfiles LOB domain profile. 31 132 IPR004883 -
Mch4g2472 218 MobiDBLite consensus disorder prediction 168 194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2472 Mch-Chr4:25556187 Mch8g2579 Mch-Chr8:28931017 1.20E-44 dispersed
Mch4g2472 Mch-Chr4:25556187 Mch9g1433 Mch-Chr9:16724604 3.51E-44 wgd
Mch4g2472 Mch-Chr4:25556187 Mch9g1398 Mch-Chr9:16416749 4.59E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43278 PF03195 LOB 1.50E-40 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2472 - - - 0.0