Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2473 ATGGGTGCTTCCAAATTTAGAGGAGTTTTGATTCTGAGTTTGGTTGTTCTGTTTTTGGGCAATGCCAGAGCTCAACTTTCCACTAGTTTTTACTCTTCTTCTTGTCCAAATCTATTGTCCACTGTCAAATCCTCTGTTCAGTCTGCTGTCTCCAGTGAGGCTCGTATGGGAGCTTCCCTTCTTCGCTTATTCTTCCATGACTGTTTTGTCAATGGCTGCGATGGGTCGATTCTATTAGACGACACGTCGAGCTTCACTGGAGAGAAAAATGCAAATCCCAACAGGAACTCTGCTAGAGGCTTTGATGTCATTGACAACATCAAAACCGCTGTCGAGAATGCTTGCCCCGGAGTTGTTTCGTGTGCGGATATTCTCGCCATTGCCGCTCGTGACTCCGTTGTTCTTGTAAGAGGACCGAGCTGGAACGTAAAGTTGGGAAGAAGAGATGCGACAACTGCGAGCCAATCCCAAGCCAACAACGACATTCCTGGACCAACTTCAAGTTTAAGCCAACTCACCTCCAGATTTAGCGCCCTTGGACTTTCCAACACCGACTTGGTCGCCCTTTCTGGTGGGCACACGATTGGACAAGCACGGTGCACGACATTTCGAGCTCGTGTATACAACGCAACCAACATCGACAGTTCATTTGCGAGCACAAGGCAAGGGAATTGCCCGAACAGCGCCGGGTCGGGCGACAACAATCTGGCCCCTCTCGATCTCCAAACTCCCAATGGTTTCGACAACAACTACTTCAAGAACCTTCTCCAGAACAGGGGCCTGCTCCAGTCCGATCAAGTTCTCTTCAACGGCGGATCTACGGACTCCACGGTCCGAAATTACGCCAACGCCCCTGCCCGTTTCTTCTCTGACTTTGCTGCAGCCATGGTTCGGATGGGAGATATCAGCCCTCTCACTGGATCCAATGGGGAAATTAGGAAGAACTGTAGGAAGATCAATTAA 963 49.64 MGASKFRGVLILSLVVLFLGNARAQLSTSFYSSSCPNLLSTVKSSVQSAVSSEARMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVENACPGVVSCADILAIAARDSVVLVRGPSWNVKLGRRDATTASQSQANNDIPGPTSSLSQLTSRFSALGLSNTDLVALSGGHTIGQARCTTFRARVYNATNIDSSFASTRQGNCPNSAGSGDNNLAPLDLQTPNGFDNNYFKNLLQNRGLLQSDQVLFNGGSTDSTVRNYANAPARFFSDFAAAMVRMGDISPLTGSNGEIRKNCRKIN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25560499 25562345 - MC04g1832 Mch4g2473 687185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2473 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 Gene3D Peroxidase, domain 2 163 299 - -
Mch4g2473 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 MobiDBLite consensus disorder prediction 147 167 - -
Mch4g2473 320 Gene3D - 30 317 - -
Mch4g2473 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 CDD secretory_peroxidase 25 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch4g2473 320 FunFam Peroxidase 29 173 - -
Mch4g2473 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Mch4g2473 320 PANTHER PEROXIDASE 72-RELATED 14 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 SUPERFAMILY Heme-dependent peroxidases 25 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2473 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Mch4g2473 320 FunFam Peroxidase 163 299 - -
Mch4g2473 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0764 Mch-Chr10:5342204 Mch4g2473 Mch-Chr4:25560499 2.68E-108 dispersed
Mch1g1198 Mch-Chr1:14343414 Mch4g2473 Mch-Chr4:25560499 1.50E-104 dispersed
Mch1g1543 Mch-Chr1:16768075 Mch4g2473 Mch-Chr4:25560499 3.16E-107 dispersed
Mch2g1164 Mch-Chr2:7960301 Mch4g2473 Mch-Chr4:25560499 1.65E-86 dispersed
Mch3g0029 Mch-Chr3:308572 Mch4g2473 Mch-Chr4:25560499 5.90E-130 dispersed
Mch3g0030 Mch-Chr3:330819 Mch4g2473 Mch-Chr4:25560499 2.51E-119 dispersed
Mch4g0127 Mch-Chr4:841842 Mch4g2473 Mch-Chr4:25560499 7.78E-128 dispersed
Mch4g2473 Mch-Chr4:25560499 Mch6g2632 Mch-Chr6:28090963 4.99E-90 dispersed
Mch4g2473 Mch-Chr4:25560499 Mch2g0799 Mch-Chr2:5500397 2.26E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2473 K00430 - csv:101218447 543.888