Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2528 ATGGCAAAGTTCAAGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCATTGTGCTGTTTCATTAGGGTATAACGAGTCCAAGTTGGCGGCTATTATGGCATCTTTCATCATTCAAAAACCTCGGCAAAGGTCACCTTTTGTCAAAGCTGCCCTAAAAACGCTTGAAAGTATTGGTGCTCTTGAGGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACAATATTGAACATGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAAATTGATATTCTAAAAAATAACATTAATGAGGATGAAACACACTCAAAGGGCTGGCTTGGCGTTAGGGCTGATGATGCTAATGCGGATACTATTGCACACAAACATGGGGTGGTACTAATTTTGAGTGAGAGACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGATTTCAAGATATCATAAACAAAGCAGTACCAAGAAGAAAACCAAACCAAGTAACTAAACCTCATTCTGCAAATACCCTTGAATATAGTAATACGGAGCTGAGGGAACCTAATAATTTTGAGCATGAACCTGTCCGAGCCCAACAGCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTCGAGTTGACTAGTCTTCTTGATGCAGTCCAAGAAACAGAAACTAAGATGGTTGAGATGTCTGCTTTGAATCACCTTATGTCTACCCACGTTTTGCAGCAAGCACAACAAATTGAATTTCTTTATGAACAGGCTGTTGAAGCTACAAAGAATGTCGAGCTTGGTAATAAAGAACTTTCCCAAGCAATTCAGCGGAATAGCAGCAGCAGAACCTTCCTTATTCTTTTTCTATTTCTGCTGAAGCATGAAGTTTTCCTGTGCCAAGTATACATCCCATGGCCTTTCTCTGTACGGCCAGATGATTTTCAGCCTCAAGATTTGTTTCTTTTCTTCGAGGGATGCTTCTCACCATCAGAGTTGCGGCAAATGCAACCAGGATAA 1038 40.46 MAKFKDRTEDFKDVVRHCAVSLGYNESKLAAIMASFIIQKPRQRSPFVKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQIDILKNNINEDETHSKGWLGVRADDANADTIAHKHGVVLILSERLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVTKPHSANTLEYSNTELREPNNFEHEPVRAQQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFLLKHEVFLCQVYIPWPFSVRPDDFQPQDLFLFFEGCFSPSELRQMQPG 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25926132 25932459 - MC04g1880 Mch4g2528 687240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2528 345 Coils Coil 94 114 - -
Mch4g2528 345 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Mch4g2528 345 SUPERFAMILY t-snare proteins 62 274 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Mch4g2528 345 Gene3D - 212 310 - -
Mch4g2528 345 FunFam Syntaxin-81 like 213 307 - -
Mch4g2528 345 PANTHER SYNTAXIN-18 1 301 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1356 Mch-Chr11:9709048 Mch4g2528 Mch-Chr4:25926132 5.07E-81 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2528 K08492 - csv:101207161 538.88