Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2553 ATGGACTATCTTCACCTCGCCGGCCGGAAACGCCGTGGAGTCCACGACGTCTTCCCCGGCCGCCACTGCCAAAACGCCGACGACGACGAAAACAACAACTATGTGGTGAAAGTTAAATATGGGGTCACTTCTGTTTGCGGGATAAGAAGAGACATGGAGGACGCGGTTTCGGTTCATCCCTTCTTCGCCGCTCTCAAAACTGATCACCCCCTTCACTTTTTTGGAGTCTTCGACGGCCACGGCTGCTCTCACGTGTCGATGAGCTGCGAGAATCGGATGCACGAAATTGTGAAGGAAGAGATGATTGAGAATGAATTGGGAGGAGAAACGGTGGCGGATCAGGAGGAGTGGAAGAGATTGATGCAACGAAGCTTCGCAAGAATGGATGAGGAAGTGAGGGAGTACCGTCGTGATACTGATTCTGATGATGCCAACCAAACGACCTCTTGTAGGTGCCAACTTCATACTCTTCATCAATACGACACCGTTGGATCCACCGCTCTTGTTGCCGTCCTCACCCCCCACAACTTCATCATTTCCAATTGCGGCGATTCACGCGCCGTCCTCTGCCGCAAAAAGCTCGCCATTCCCCTCTCCAACGACCACAAGCCGGATCGGCCAGACGAATTGGTGCGTATTGAATCGAGCGGCGGGCGAGTGATAAACTGGGATGGCCCGAGAGTGCTGGGGGTTTTGGCGACCTCGAGAGCCATCGGAGACGGCAATTTGAAGCCGTACGTGATATCGGAGCCGGAGGTGGTGGTAATGGATCGGACGGCGGAGGATGAGTTTGTGGTACTAGCCACGGATGGGCTGTGGGACGTGGTGTCCAATGACACGGCATGCGAGGCTGTTCGCACGTGCATGAGGGCGCAGAGGGACCGCCCCACGTCCTCGCTTGCGCCGTCGCAGTCGTCGCCGAGGGGCATGGGCTGCAGCTGCGACAAAACTTGCTCCGATGCCTCCATTGTTCTCACCAAGTTGGCCATGGCCAGACACAGTTCAGACAACATTAGCGTAGTAGTCATAGATTTGAGAAGAGACAGAATTGAAGCATCCAAAACTTGA 1068 54.87 MDYLHLAGRKRRGVHDVFPGRHCQNADDDENNNYVVKVKYGVTSVCGIRRDMEDAVSVHPFFAALKTDHPLHFFGVFDGHGCSHVSMSCENRMHEIVKEEMIENELGGETVADQEEWKRLMQRSFARMDEEVREYRRDTDSDDANQTTSCRCQLHTLHQYDTVGSTALVAVLTPHNFIISNCGDSRAVLCRKKLAIPLSNDHKPDRPDELVRIESSGGRVINWDGPRVLGVLATSRAIGDGNLKPYVISEPEVVVMDRTAEDEFVVLATDGLWDVVSNDTACEAVRTCMRAQRDRPTSSLAPSQSSPRGMGCSCDKTCSDASIVLTKLAMARHSSDNISVVVIDLRRDRIEASKT 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26060666 26062438 - MC04g1904 Mch4g2553 687265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2553 355 SMART PP2C_SIG_2 43 345 IPR001932 -
Mch4g2553 355 ProSiteProfiles PPM-type phosphatase domain profile. 39 345 IPR001932 -
Mch4g2553 355 SMART PP2C_4 25 343 IPR001932 -
Mch4g2553 355 FunFam Protein phosphatase 2C 50 26 352 - -
Mch4g2553 355 CDD PP2Cc 38 345 IPR001932 -
Mch4g2553 355 Pfam Protein phosphatase 2C 39 338 IPR001932 -
Mch4g2553 355 PANTHER PROTEIN PHOSPHATASE 32 344 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch4g2553 355 SUPERFAMILY PP2C-like 34 346 IPR036457 -
Mch4g2553 355 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169(InterPro)
Mch4g2553 355 Gene3D - 34 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0195 Mch-Chr3:2450485 Mch4g2553 Mch-Chr4:26060666 6.57E-117 dispersed
Mch4g2553 Mch-Chr4:26060666 Mch8g0557 Mch-Chr8:3997575 1.04E-64 dispersed
Mch4g2553 Mch-Chr4:26060666 Mch6g0853 Mch-Chr6:5919257 7.71E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2553 K14497 - csv:101220425 427.172