Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g2556 | ATGGCGAATAGATCTTGGTGGGCTGGAATTGGGAATCTTAGCATGACTGGAATCGACGATCCTTCCAATTTATCTTCATCTCCATCCTTCGATCATCCCAAAATTACGCAACACCAAGAGGAGGAGGACCATCAAATTGGGCCATCCAGAAACCCTAAGCCACGCGGCCAAGACTACTCCGAAGAAGACGATACTAAAAAACAGCGCCGCCCACGAGGCCGCCCCCCGGGCTCCAAAAACAAGCCCAAGCCCCCCATTGTCATCACCAAACACAGCCCCAACGCCCTCCACAGCCACGTCCTCGAGATCACCGCCGGCACCGACATCGCCCACTCCATCTCCGCCTTCGCCCACCGCCGCCGCTGCGGCGTCTCCATCCTCAGCGGTAGTGGCGCCGTCGCCGACGTCACCCTCCGCCAGCCGGCCGCGCCCGGCGGGGTTGTAACCTTCCGCGACCGGTTCGAGATATTGTCCCTCTCCGGCGCGTTCCTGCCGGCGCCGACGCCGACGCCGCATGGGGCGAACGGGCTGACGGTGTACCTGGCCGGCGGGCAAGGGCGGGTCGTGGGAGGGCTGGTGGCGGGCCCGCTGATGGCAGCCGGTCCGGTGATTGTAATTGCGGCGTCGTTTACGAATGCAATTTACGAGAAATTGCCAATCGAGGAATTAGATGATGAAGAGATGAATGCGAATAATGATGAGGAAATGGGATTAGAGAAACAATCGGGAGATGGAGATAACAGTAATGGGAATAATTCAGCATCTCAGGCACGGGCAGTGGGAGAATCGGTATATAATTTGATTCCAAATAATTCTCAAATTTCCCATGATGTTTTTTGGGGTCCTCTTCCTCCTCCTCCATCTTAT | 867 | 56.63 | MANRSWWAGIGNLSMTGIDDPSNLSSSPSFDHPKITQHQEEEDHQIGPSRNPKPRGQDYSEEDDTKKQRRPRGRPPGSKNKPKPPIVITKHSPNALHSHVLEITAGTDIAHSISAFAHRRRCGVSILSGSGAVADVTLRQPAAPGGVVTFRDRFEILSLSGAFLPAPTPTPHGANGLTVYLAGGQGRVVGGLVAGPLMAAGPVIVIAASFTNAIYEKLPIEELDDEEMNANNDEEMGLEKQSGDGDNSNGNNSASQARAVGESVYNLIPNNSQISHDVFWGPLPPPPSY | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 26074598 | 26075464 | + | MC04g1907 | Mch4g2556 | 687268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g2556 | 289 | Gene3D | - | 97 | 239 | - | - | |
Mch4g2556 | 289 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 40 | 282 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch4g2556 | 289 | MobiDBLite | consensus disorder prediction | 16 | 33 | - | - | |
Mch4g2556 | 289 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Mch4g2556 | 289 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 93 | 226 | - | - | |
Mch4g2556 | 289 | CDD | DUF296 | 99 | 210 | IPR005175 | - | |
Mch4g2556 | 289 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 98 | 211 | IPR005175 | - | |
Mch4g2556 | 289 | MobiDBLite | consensus disorder prediction | 242 | 258 | - | - | |
Mch4g2556 | 289 | ProSiteProfiles | PPC domain profile profile. | 93 | 231 | IPR005175 | - | |
Mch4g2556 | 289 | FunFam | AT-hook motif nuclear-localized protein | 96 | 227 | - | - | |
Mch4g2556 | 289 | PIRSF | ESCAROLA | 14 | 285 | IPR014476 | GO:0003680(InterPro) | |
Mch4g2556 | 289 | MobiDBLite | consensus disorder prediction | 34 | 71 | - | - | |
Mch4g2556 | 289 | MobiDBLite | consensus disorder prediction | 236 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch11g1610 | Mch-Chr11:14553066 | Mch4g2556 | Mch-Chr4:26074598 | 2.64E-28 | dispersed | |
Mch11g1614 | Mch-Chr11:14677106 | Mch4g2556 | Mch-Chr4:26074598 | 4.79E-33 | dispersed | |
Mch4g2556 | Mch-Chr4:26074598 | Mch8g2974 | Mch-Chr8:32422099 | 1.10E-65 | dispersed | |
Mch4g2556 | Mch-Chr4:26074598 | Mch9g1539 | Mch-Chr9:17699058 | 8.31E-71 | wgd |
Pathway information
