Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2596 ATGTTCGCCAAAAACGGCCTAACCCAAACCGACATGATAGCTCTGTCGGGAGCCCACACGGTCGGGTTCTCCCACTGCAGCCGCTTCGCCGACCGCCTCTACGCCTTCTCCCCGTCGTCGCCGGTGGACCCGTCTCTGGACCCAAACTACGCCAAGCAGCTCATGAAATCTTGCCCCCAAGACGTGGACCCCAGAGTAGCCGTGGACATGGATCCCGTAACCCCTCAGAAACTGGACAACATTTATTATCAGAATCTGGTGAACCACAAGGGCCTGTTCACGTCGGACCAGGTTCTGTTCACCGATCCCTTGTCGCAGCCCACCGTTAATGGCTTCGCCACGGATCGCAGTAGTTTCAATAAAGCATTTGCCGCCGCCATGGTCAGGCTTGGGAGGGTGGGCGTTAAGACTGGTATTTCGGGTCAGATTAGAACAGACTGCACCGCCTACAATTCTTAA 459 55.99 MFAKNGLTQTDMIALSGAHTVGFSHCSRFADRLYAFSPSSPVDPSLDPNYAKQLMKSCPQDVDPRVAVDMDPVTPQKLDNIYYQNLVNHKGLFTSDQVLFTDPLSQPTVNGFATDRSSFNKAFAAAMVRLGRVGVKTGISGQIRTDCTAYNS 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26302284 26303287 + MC04g_new0652 Mch4g2596 687308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2596 152 PANTHER - 1 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 Pfam Peroxidase 1 115 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 Gene3D Peroxidase, domain 2 2 130 - -
Mch4g2596 152 ProSitePatterns Peroxidases proximal heme-ligand signature. 11 21 IPR019793 -
Mch4g2596 152 Gene3D - 131 151 - -
Mch4g2596 152 PRINTS Plant peroxidase signature 69 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 PRINTS Plant peroxidase signature 85 102 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 PRINTS Plant peroxidase signature 10 22 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 PRINTS Haem peroxidase superfamily signature 71 86 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 PRINTS Haem peroxidase superfamily signature 11 26 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 FunFam Peroxidase 1 130 - -
Mch4g2596 152 ProSiteProfiles Plant heme peroxidase family profile. 1 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2596 152 SUPERFAMILY Heme-dependent peroxidases 1 151 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2596 Mch-Chr4:26302284 Mch9g0619 Mch-Chr9:4634424 9.88E-36 dispersed
Mch4g2596 Mch-Chr4:26302284 Mch4g2597 Mch-Chr4:26306352 1.47E-70 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2596 K00430 - csv:101213098 254.218