Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g2597 ATGGGAGCTTTGCGTAATTGTGTTTGTGCTTTGATTTTAATGGTGATTTTTGCAGCGAAGGGAGGAGAGGGGCAGCTGGTGGAGAATTTCTATGGATCCAGCTGCCCAAACTTGGAACAAATTGTGCGACAGGCAGTTCAGAACAAGCTTTCCCAAACCATTATTACTCTTCCTGCCACTCTCCGTCTCTTCTTTCACGACTGTTTTGTCGAGGGATGCGATGCTTCAGTGATGATTTCATCGCCCACCGGAGACGCAGAGAAGGACGCTCAGGATAACCTCTCCCTCGCCGGAGATGGATTCGACACCGTCGTCAAGGCCAAGCAGGCCGTCGAAGCCGCCTGCCCCGGCCGTGTCTCCTGCGCCGACATATTGGCTCTCGCCGCCAGAGACGCCGTCGTCCTCGCCGGAGGCCCCAGTTTTAGCGTCGAATTAGGGCGCCGCGACGGCCGAATCTCCAAAGCCTCGAGCGTCGACGGCAATTTACCATCCCCCAATTTCGATCTCAACAGACTGACATCCATCTTCGCCAAAAACGGCCTCTCCCAGACCGACATGATCGCTCTCTCCGGCGCCCACACCATCGGCGCCTCTCACTGCAACCGCTTCGCCGATCGCCTCTTCTCTCATTTCAATTTGATTCAGGGATGTGATGCTTCGGTGTTGATAGCATCCCCAAATGGGGATGCAGAGAAGGATGCTCAAGACAATCTTTCATTGGCAGGAGATGGTTTTGACACCGTTGTTAAAGCTAAAGAAGCTGTTGAAGCCTCTTGCCCTGGCATCGTCTCTTGCGCTGACATTCTAGCTCTTGCAACTAGAGACGTCGTCATGTTGGCCGGAGGCCCAGATTACAGCGTTGAACTGGGCCGTCGAGATGGGCTGGTTTCGGAAGCCTCACGAGTGGCCGGAAACCTGCCGGAGCCGTCGTTCGATCTGGACCAACTGACGACCATGTTCGCCGGACACAACCTGAGCCAGGTGGACATGATAGCGCTGTCGGGGGCCCACACGGTGGGGTTCTCCCACTGCAACCGTTTCGCGAACCGGCTGTACTCGTTCTCGCCGTCGTCGCCGGTGGACCCGTCGCTGGACCCGACTTACGCCCAGGAGCTGATGCAGGCTTGTCCCCAGAACGCGGACCCCAGCATTGCCATAAACATGGATCCTCAGACCCCACGAATCTTCGACAACGTGTACTACCAGAATCTGGCCGCCGGCAAGGGCCTCTTCACCTCCGACCAGATTCTGTTCACGGAATCCGAATCTCAGACCACCGTCACCGGCTTTGCCAACAACGGGGCGGAGTTTAATGCGGCGTTCGTCACGGCGATGACTAAGATGGGTCGGGTCGGGGTCAAGACGGGCCAGGCTGGCGAAATTCGAATCGATTGCAGCGCCTTTAATTAA 1410 56.45 MGALRNCVCALILMVIFAAKGGEGQLVENFYGSSCPNLEQIVRQAVQNKLSQTIITLPATLRLFFHDCFVEGCDASVMISSPTGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPSFSVELGRRDGRISKASSVDGNLPSPNFDLNRLTSIFAKNGLSQTDMIALSGAHTIGASHCNRFADRLFSHFNLIQGCDASVLIASPNGDAEKDAQDNLSLAGDGFDTVVKAKEAVEASCPGIVSCADILALATRDVVMLAGGPDYSVELGRRDGLVSEASRVAGNLPEPSFDLDQLTTMFAGHNLSQVDMIALSGAHTVGFSHCNRFANRLYSFSPSSPVDPSLDPTYAQELMQACPQNADPSIAINMDPQTPRIFDNVYYQNLAAGKGLFTSDQILFTESESQTTVTGFANNGAEFNAAFVTAMTKMGRVGVKTGQAGEIRIDCSAFN 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 26306352 26313531 + MC04g1945 Mch4g2597 687309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g2597 469 FunFam Peroxidase 307 448 - -
Mch4g2597 469 Gene3D - 26 164 - -
Mch4g2597 469 ProSitePatterns Peroxidases proximal heme-ligand signature. 329 339 IPR019793 -
Mch4g2597 469 Gene3D Peroxidase, domain 2 165 208 - -
Mch4g2597 469 CDD secretory_peroxidase 25 468 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch4g2597 469 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Haem peroxidase superfamily signature 389 404 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 Gene3D Peroxidase, domain 2 307 448 - -
Mch4g2597 469 SUPERFAMILY Heme-dependent peroxidases 25 210 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 Pfam Peroxidase 206 433 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 PANTHER - 206 469 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Mch4g2597 469 SUPERFAMILY Heme-dependent peroxidases 215 469 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g2597 469 Gene3D - 209 469 - -
Mch4g2597 469 FunFam Peroxidase 29 175 - -
Mch4g2597 469 ProSiteProfiles Plant heme peroxidase family profile. 25 469 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1272 Mch-Chr1:14928910 Mch4g2597 Mch-Chr4:26306352 8.43E-120 dispersed
Mch2g1334 Mch-Chr2:9447582 Mch4g2597 Mch-Chr4:26306352 4.02E-116 dispersed
Mch4g0227 Mch-Chr4:1463068 Mch4g2597 Mch-Chr4:26306352 4.99E-98 dispersed
Mch4g2597 Mch-Chr4:26306352 Mch9g0618 Mch-Chr9:4617641 2.09E-93 dispersed
Mch4g2596 Mch-Chr4:26302284 Mch4g2597 Mch-Chr4:26306352 1.47E-70 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g2597 K00430 - csv:101213580 431.795