Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0012 | ATGGAGAGGATTCCAGAGTCAAAAGCACTTCCATTATTATTGCCCATAGAGTTGGTTCCAGAATCGAAGGTACTTGCAGGTAAATTTTGTGTTTTGGATGATGTACCAATAGCACATGTGGCGTCAGCCAAGCAAGCAGGCCATTGGTCGGACATGCACTCAGCTAAGGTAAGAGAAGCGGGAAGATCCACTGGACAAGGATTTCAAGATCCAGAAGTTTCTGTACCTATACGGACATTAAAGGGAAAATCCTCTTTTTTGGGGCAGGAAGAACCTAAGCGTGATGTCACATTAAAGGGTAGTAGCAATTTAATTGAGGAAGGTGGTCCAAGTTCCTTCTCTGGGGCTAGCCACCCCCCAGAGCCTGTGGATATGGATCTGATGAGAACTGTTTATGTACCCCTGAGGCAAAATAAATCTGACGCTAGCTGCTTGATCAAGAGTTTTTCCGTGAAGGGCCCTTTTCTTGAGGATCTTTCAATCAGGGTTCCAGCCAAGAAACCATTCCAAGCTGCTCTCTCCCCTGCAGAAAGCTTAGTCGATGAACCACATGACTTGGGTGTTTTATCTTCCCCCTTTTCAGTTCCTCGTGCATCACAAAATACAGAAACTTCTCTCCTTCCCCCAGATTCCGAGGAAAAGGAATGTGTTTGGGATGCTTCTTTGCCCCCGAGTGGTAATGTAAGTCCACTCAGTAGCATTGACAGTAGTGGAGTTGTCACAGCTATGAGCATTGTCAATAGTTGTGCTAGCACATATCGAAGTGATGGAATGGTTAGCATTGAAAGAAACTGTGAGAGTACAAAAGGAAGCATTAGAGGGGACTCTCTTGAGAGTGCAAAAACAAGTATTAGTCGAGCTAGTGATAGCAGTGGTCTTAGTGATGATAGTAGTTGGAGCAACATCACAGGAAGTGCTAATAAGCCCCACAAAGGAAACGATCCTAGGTGGAAAGCCATTCTTGCTATTCGAGCAAGAGATGGAATATTAGGCATGAGTCATTTTAGACTGCTGAAGAGACTTGGCTGTGGTGATATTGGTAGTGTTTATCTCTCAGAGCTAAGTGGGACTCGCTGTTACTTTGCCATGAAAGTAATGGATAAGGCATCGCTTGCTATCAGGAAGAAGCTGACGAGGGCTCAGACAGAAAGGGAGATATTGCAGTTACTTGACCATCCATTTCTCCCGACTTTGTACACCCACTTTGAGACTGACAGATTTTCCTGTCTAGTAATGGAATATTGTCCTGGGGGCGACCTGCACACTTTGAGGCAACGACAACCGGGGAAACACTTCTCTGAGTATGCTGCAAGGTTTTATGCAGCAGAGGTTCTACTGGCACTCGAATATCTTCACATGCTTGGAGTTGTTTATAGGGACTTGAAACCAGAGAATGTACTGGTTCGTGATGATGGCCACATAATGCTCTCAGATTTCGACCTTTCACTAAGATGTGCAGTGTCACCCACCCTGATAAAGACCTCATACGATTCTGACCCATCAAAACGAGCTGCATTTTGTGTCCAGCCTGCTTGTATTGAGCCGTCATCAGTATGCATCCAACCTGCATGCTTTCTTCCTCGCCTCTTCCCTCAGAAAAGTAAAAAGAAAAGTCCCAAGCCTCGGAGTGAGTTGGGGTTGCAATCCAGTACACTTCCTGAGCTTGTAGCGGAGCCTACTGCTGCCCGATCCATGTCTTTTGTTGGCACCCATGAATACCTAGCCCCTGAAATAATTAAAGGAGAAGGTCATGGAAGTGCTGTTGATTGGTGGACTTTTGGCATTTTCTTGCATGAACTATTATATGGAAAAACCCCATTCAAGGGATCAGGAAACAGAGCCACACTATTCAATGTAGTAGGGCAGCAACTGAAGTTCCCAGAGTCTCCAGCAACTAGTTATGCTAGCCGAGATCTTATACGGGGTTTACTAGTAAAGGAGCCACAGCATCGGCTCGGAGTGAAGAGGGGTGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTCAATTGGGCTTTGATTCGATGCAGCACGCCCCCAGAAGTGCCAAGACCAATGGAGGCCGAGCTGCCTAAGTTTGGGGTAGTTGACACAACAGGGGTTGGCAGCAGCAGTAAGAGGATGGTAGGGACGGATGTTGTTAAAGCTGGTGGTCAATATCTTGATTTCGAGTTCTTTTAA | 2184 | 45.92 | MERIPESKALPLLLPIELVPESKVLAGKFCVLDDVPIAHVASAKQAGHWSDMHSAKVREAGRSTGQGFQDPEVSVPIRTLKGKSSFLGQEEPKRDVTLKGSSNLIEEGGPSSFSGASHPPEPVDMDLMRTVYVPLRQNKSDASCLIKSFSVKGPFLEDLSIRVPAKKPFQAALSPAESLVDEPHDLGVLSSPFSVPRASQNTETSLLPPDSEEKECVWDASLPPSGNVSPLSSIDSSGVVTAMSIVNSCASTYRSDGMVSIERNCESTKGSIRGDSLESAKTSISRASDSSGLSDDSSWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLAIRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTSYDSDPSKRAAFCVQPACIEPSSVCIQPACFLPRLFPQKSKKKSPKPRSELGLQSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPMEAELPKFGVVDTTGVGSSSKRMVGTDVVKAGGQYLDFEFF | 727 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 79991 | 87453 | - | MC05g0011 | Mch5g0012 | 687431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0012 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 419 | 490 | - | - | |
Mch5g0012 | 727 | MobiDBLite | consensus disorder prediction | 269 | 308 | - | - | |
Mch5g0012 | 727 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 456 | 468 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch5g0012 | 727 | ProSiteProfiles | Protein kinase domain profile. | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0012 | 727 | Pfam | Protein kinase domain | 564 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0012 | 727 | Pfam | Protein kinase domain | 336 | 486 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0012 | 727 | MobiDBLite | consensus disorder prediction | 191 | 214 | - | - | |
Mch5g0012 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 563 | 684 | - | - | |
Mch5g0012 | 727 | FunFam | serine/threonine-protein kinase D6PK-like | 562 | 685 | - | - | |
Mch5g0012 | 727 | MobiDBLite | consensus disorder prediction | 193 | 207 | - | - | |
Mch5g0012 | 727 | FunFam | Serine/threonine-protein kinase D6PK-like | 333 | 418 | - | - | |
Mch5g0012 | 727 | SUPERFAMILY | Protein kinase-like (PK-like) | 317 | 691 | IPR011009 | - | |
Mch5g0012 | 727 | PANTHER | FLIPPASE KINASE 1-RELATED | 211 | 688 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch5g0012 | 727 | SMART | serkin_6 | 335 | 667 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch5g0012 | 727 | Gene3D | Phosphorylase Kinase; domain 1 | 333 | 418 | - | - | |
Mch5g0012 | 727 | MobiDBLite | consensus disorder prediction | 269 | 312 | - | - | |
Mch5g0012 | 727 | CDD | STKc_phototropin_like | 333 | 686 | - | - | |
Mch5g0012 | 727 | FunFam | serine/threonine-protein kinase D6PK-like | 419 | 486 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0265 | Mch-Chr2:1980006 | Mch5g0012 | Mch-Chr5:79991 | 8.55E-130 | dispersed | |
Mch5g0012 | Mch-Chr5:79991 | Mch8g1468 | Mch-Chr8:10997803 | 2.31E-215 | dispersed | |
Mch5g0012 | Mch-Chr5:79991 | Mch3g0725 | Mch-Chr3:11538666 | 1.11E-227 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77381 | PF00069 | Pkinase | 5.40E-36 | CL0016 | Mch | PK |
Pathway information
