Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0066 CAAATTCAGTCCGGTGAGGTCATCATGAATGATCAAGAAGAACCCAAAAGGCCCCAATTCCCTCTCGATTCAAGCTCTTACAGAATCATCGACGAAATTGGGGTCGGCGTGAGCGCCGTCGTGTACAAAGCCATCTGCATTCCCATGAACTCCGCGGTGGTGGCTATCAAATCCATCGACCTCGACCGATCGCGGGCCGATTTTGACGATATCCGAAGGGAAGCCCAAATTCTGTCGCTTCTCTCTCACCCCAATATTCTCAACGCCCACTGTTCTTTCACCGTCGATCGTCGGCTCTGGGTCGTCATGCCGTTTATGTCCGCCGGGTCTCTGCAGTCCATCATTACGTCATCGTTTCCCGACGGTTTGCCGGAGCCCTGCATCGCCGTCGTACTCCGGGAAATTCTGAGCGCCCTGGCTTATCTCCACGACCAAGGCCACCTCCACCGCGACATTAAAGCCGGCAACATTCTGATGGACTCAAACGGGTCCGTTAAGCTCGCGGATTTCGGAGTTTCCACTTCGATTTTCGAGGCCAATGCGAAACAGGGGTTGTCGACTTCTTCGCTGTCGGCGTCGATGATGAAGCTAACGGACGTCGCCGGAACGCCGTACTGGATGGCGCCGGAGGTGATCCACTCGCATAATGGGTATAGTTTGAAGGCGGATATATGGTCATTTGGGATCACGGCGTTGGAATTGGCCGATGGACGCCCTCCCCTGTCTCATCTCCCGCCCTCCAAGTCTCTGCTTCTCAAAATCACGCGGCGCTTTCGATTCTCCGACTACGACAACGGCCGCAACAGCAAGAACAAATTCTCCAAAGGGTTTAAGGAGTTGGTCGCGTCTTGCCTCGATCAGGAGCCGTCCAAGAGGCCCTGCGCCCAGAAATTGCTGAAGCATTCGTTCTTCAGGAATTGCAAGGGCCCCGATGTTCTGGTCAGAACTGTGCTGCAGGGTTTGCCGAGTGTTGAAGAGAGGTTCAAATTGGGGAAACTGCAGCACTTGCCGTCGGTGAAAATCGACGGCGATGAGGGCGAGGAAGGGGAATTGGAGGAGGAGATTATCAAACAGAGGAGGATCAGCGGGTGGAATTTTAACGAGGACGGGCTGGAACTGGACCCGGTTTTCCCAGGTGAAAATTGCGAGGAGGATGAGTGTTCGATTGTAAAACAGGTTCGATTCGGCGGCGAATCGGTCATCGACGAGAAGGGTTCGGGGGATTCGAGCGAGTGCTGTTCGGGGCTGAGTTCGCCGAGCCAAACGGGGAACGACGGAGACCGGAGAAGCGGCGGCGGCGGTGGAGGGGAGGAAGAAATAGTGGACAAGGAGGCGATAGTGGGGGGATTGATGGCGTTGAAGAGGAGCTTAGACGAGCAGCGGCGGACGGTTGGGAATTTGATAGAGTTTTTGGAGGGGGAGAAAAATGGGGAGATGAACAGGGAGGAGCAAATGGTGAGGCTGATTGAGAAGATGACCCAGGAATTGGAGAATGAGAGGAACAGGAACTTCGAATTGGAGATGGAGTTGGAATTTCTAAGGCTTCAGATTTCTCCTGCATATAAT 1566 54.15 QIQSGEVIMNDQEEPKRPQFPLDSSSYRIIDEIGVGVSAVVYKAICIPMNSAVVAIKSIDLDRSRADFDDIRREAQILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILSALAYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSTSIFEANAKQGLSTSSLSASMMKLTDVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELADGRPPLSHLPPSKSLLLKITRRFRFSDYDNGRNSKNKFSKGFKELVASCLDQEPSKRPCAQKLLKHSFFRNCKGPDVLVRTVLQGLPSVEERFKLGKLQHLPSVKIDGDEGEEGELEEEIIKQRRISGWNFNEDGLELDPVFPGENCEEDECSIVKQVRFGGESVIDEKGSGDSSECCSGLSSPSQTGNDGDRRSGGGGGGEEEIVDKEAIVGGLMALKRSLDEQRRTVGNLIEFLEGEKNGEMNREEQMVRLIEKMTQELENERNRNFELEMELEFLRLQISPAYN 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 447074 448639 + MC05g0062 Mch5g0066 687485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0066 522 Gene3D Phosphorylase Kinase; domain 1 16 105 - -
Mch5g0066 522 ProSiteProfiles Protein kinase domain profile. 27 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0066 522 MobiDBLite consensus disorder prediction 400 440 - -
Mch5g0066 522 ProSitePatterns Protein kinases ATP-binding region signature. 33 57 IPR017441 GO:0005524(InterPro)
Mch5g0066 522 SMART serkin_6 27 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0066 522 MobiDBLite consensus disorder prediction 410 427 - -
Mch5g0066 522 SUPERFAMILY Protein kinase-like (PK-like) 25 320 IPR011009 -
Mch5g0066 522 FunFam Serine/threonine-protein kinase BLUS1 16 105 - -
Mch5g0066 522 Pfam Protein kinase domain 27 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch5g0066 522 Gene3D Transferase(Phosphotransferase) domain 1 109 326 - -
Mch5g0066 522 MobiDBLite consensus disorder prediction 1 20 - -
Mch5g0066 522 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 19 378 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Mch5g0066 522 Coils Coil 479 516 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2219 Mch-Chr4:23817061 Mch5g0066 Mch-Chr5:447074 5.91E-107 dispersed
Mch5g0066 Mch-Chr5:447074 Mch8g1508 Mch-Chr8:11515694 4.52E-105 dispersed
Mch5g0066 Mch-Chr5:447074 Mch7g0995 Mch-Chr7:14165140 1.43E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77382 PF00069 Pkinase 1.10E-57 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0066 K08835 - csv:101215648 756.903