Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0093 ATGACGCAACAACTGGGAGTGCTGAGTGCACTGGATGTGGCGAAGACTCAATGGTACCATTTCACGGCCATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGATCTCTTCTGCATCGCCGTAGTCTCCCGATTACTCGGCCGCATATACTACTACTCCCCGGGCTCCGCCAGGCCGGGCTCTCTTCCGCCCAACGTCTCTGCCGCCGTCAGCGGCGTTGCCCTCTGCGGCACTCTCTCCGGCCAGCTCTTCTTCGGCTGGCTCGGCGACAAGATGGGCCGGAAGAAGGTCTACGGCATAACGCTGATTCTGATGGTCCTCTGCTCCCTCGCCTCCGGCCTCAGCTTCGGCCATTCCGCCAAAGCAACCATGACCACGCTCTGCCTCTTCCGATTCTGGCTCGGCTTCGGCATCGGCGGCGATTACCCACTCTCCGCCACCATCATGTCCGAATACGCCAACAAGAAAACCCGCGGCGCGTTTATCGCCGCCGTCTTTGCAATGCAAGGATTCGGGATCCTGGCCGGCGGGATCGTCGCTTTGATCGTTTCGGCAGCGTTCAACAACAGATTCTCGGCGCCGTCGTACGAGATGGACCCCGTGGGCTCAACCGTGCCGGAGGCCGATTACGTGTGGCGCGTGGTCCTAATGTTCGGCGCCATCCCCGCCGGTATGACCTACTACTGGCGGATGAAGATGCCGGAAACCGCCCGCTACACCGCCCTGGTGGCGAAGAACGCGAAACAAGCCGCGGCCGACATGTCGAAAGTCCTCCAAGTGGAGCTGCAGGCGGAAGAGGAGAAGTTGGAGAAAATAGTGGCGACGGACAAAAACAATTTCGGGCTATTTTCGAAGCAGTTCCTGAGGCGCCACGGGCTCCACTTGCTGGGGACGACAAGCACGTGGTTCCTTCTGGACATCGCATTCTACAGCCAGAATCTGTTCCAGAAGGATATCTTCACGGCCATTGGGTGGCTCCCACCGGCCAAGACCATGAGCGCTCTCGAGGAGTGCTTCCGGATCGCAAAAGCCCAAACGCTGATTGCTCTGTGTGGGACGGTGCCCGGGTATTGGTTCACCGTCGCGCTAATTGACATCATTGGCAGATTCACCATTCAGTTAGTTGGGTTCATCATGATGACTATTTTCATGTTTGCCCTCGCCTTTCCCTACCACCATTGGACTATGAAGGAGAATCGAATTGGGTTCCTCGTCATGTACTCATTGACGTTTTTCTTCGCCAATTTTGGGCCCAATTCCACCACTTTCATTGTTCCCGCCGAGATCTTCCCGGCCAGGCTCAGGTCTACTTGCCACGGGATTTCCGCCGCCGCCGGGAAGGCCGGAGCCATCGTCGGGGCATTCGGGTTTTTGTACGCCGCGCAAAATTCCGACCCGTCCAAGACGGACCCGGGTTACCCACCGGGTTTCGGCGTCAAGAACTCGCTTATTACGCTCGGTTGCATCAATTTCCTCGGTGCTTTGCTCACGTTGTTGGTGCCGGAGCCCAAAGGAAAATCGCTGGAGGAGTTGACCGGCGAGAATGAGATTGAGGAAGACGGCGCCGCCGTGGAACATCAG 1587 57.91 MTQQLGVLSALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSRLLGRIYYYSPGSARPGSLPPNVSAAVSGVALCGTLSGQLFFGWLGDKMGRKKVYGITLILMVLCSLASGLSFGHSAKATMTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAAFNNRFSAPSYEMDPVGSTVPEADYVWRVVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELQAEEEKLEKIVATDKNNFGLFSKQFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWLPPAKTMSALEECFRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLVGFIMMTIFMFALAFPYHHWTMKENRIGFLVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQNSDPSKTDPGYPPGFGVKNSLITLGCINFLGALLTLLVPEPKGKSLEELTGENEIEEDGAAVEHQ 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 602570 604156 + MC05g0085 Mch5g0093 687512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0093 529 Gene3D MFS general substrate transporter like domains 270 528 IPR036259 -
Mch5g0093 529 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Mch5g0093 529 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Mch5g0093 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 8 512 - -
Mch5g0093 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857(InterPro)
Mch5g0093 529 FunFam Inorganic phosphate transporter 1-6 19 527 - -
Mch5g0093 529 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Mch5g0093 529 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch5g0093 529 CDD MFS_PhT 24 506 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0093 Mch-Chr5:602570 Mch5g0094 Mch-Chr5:614370 5.73E-289 tandem
Mch10g0098 Mch-Chr10:551639 Mch5g0093 Mch-Chr5:602570 1.73E-227 transposed
Mch4g1756 Mch-Chr4:20598085 Mch5g0093 Mch-Chr5:602570 7.16E-289 transposed
Mch5g0093 Mch-Chr5:602570 Mch6g2034 Mch-Chr6:22647327 1.34E-49 wgd
Mch5g0093 Mch-Chr5:602570 Mch7g0960 Mch-Chr7:13996283 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0093 K08176 - csv:101213007 971.459