Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g0146 | CAGGCTGGTCAAGTAAATCTCGTGGTTGGATCTCTTGTTTGGATTGAGGATCCTGATGTAGCTTGGTTAGATGGGGAAGTAGTGGAAGTTAATGGCCAAGATATCAAAGTACTCTGTACAACAGGGACTACTGTTGAGGTCAAATCTGCAAGTGTCTATCCGAAGGATCCTGAATTTCCGTCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCAGGACTTCTACAAAACTTAAAATTTCGTTACGATGTTAATGAAATTTATACCTATACTGGAAGTATACTAATAGCTGTAAATCCTTTTCGAAGACTTCCTCATCTATATGCTCATGAAATGATGGAAGATTATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCATTTGCCATTGCAAATTCTGCTTATAGGTACTCCCACATATCCTATATACAGATGATTAATGAGGGTATCAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACAGAGAGTACGAAGATGCTTATGCGCTATCTTGCCTTTGTTGGAGGGAGAGCCGGAGGGAAGTCTGCAAGTGGTGAACGTTCTGTTGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAACGCAAAGACTGTTAGAAACAATAATTCAAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGTTTGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCTGCACCGCCAGAGGAAATTGAAAAATATAAATTAGGGAATCCAAGATCATTTCATTATCTTAATCAATCCAATTGCTGCGAACTTGATGGAGTGGATGATTCCGAGGAATATCTTTCTACTAGGAAAGCTATGGATGTTGTTGGAATAAGTACAAGTGATCAGGATGCAATATTTCGAGTAGTAGCTGCAATACTTCATCTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGTAGATTCCTCTGAACCTAAGGATGATAAATCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGTCTCTTGAGGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACAAAATGTCTCGATCCAGACTCTGCTACTCTTAGTAGGGATGCTTTAGCAAAAATTGTTTATTCAAGACTATTTGATTGGATTGTTGATACGATTAATAACTCAATTGGCCAAGATCCTCATTCAAAGCACTTAATTGGGGTTTTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGGTGCTTAACTGGTACGCTTTTGCTTTCGCTTTGTTTTTTAGTATGTATTGGTCTATGCAGCTTTGAGCAATTCTGTATCAACCTGACAAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACCAAAGAAGAAATTAACTGGAGCTATATTGACTTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGTGTCATTGCTCTTCTGGATGAGGCCTGCATGTTTCCAAGATCCACACATGAAACTTTTGCGCAGAAACTTTATCAAACTTTTAAGGACCATAAGCGCTTTAGTAAGCCTAAATTGGCACGAACTGACTTCACAATTTGTCATTATGCTGGTGACGTTACGTACCAAACTGAACTCTTCCTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGAGCGCTTCTAAGTGCACCTTTGTTTCAGGGCTCTTCCCCCCCTTACCTGAAGATTCTTCCAAATCCTCTAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTCGAGACGCTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAACCTTCTTAAACCATCCATCTTTGAGAATAATAATGTTTTACAGCAGCTCCGATGTGGAGGAGTCATGGAAGCAATCAGAATCAGTTGCGCTGGATATCCCACTAGGAAGACGTTTGATGAATTTATTGCTCGGTTTAAAATCTTGGCACCTGATGTGTTGCATGGAAGCTGTGGTGAATCCACTGCGTGTAAGAGGCTTTTGGAGAAAGTTAACCTTAAAGGATATCAGATTGGTAAAACCAAAGTCTTTCTCAGAGCTGGTCAGATGGCACAATTAGATGGTTGCCGAACTGAGGTCTTGGGAAGAGCTGCCATTGTTATCCAAAAGAAGGTTCGCTCATATTTGGGACGCAAAAAATTTATTTTGTTGCGGTTGTCTGCTGTACAAATTCAAGCCGTGTGTAGAGGACAAGTTGCACGCCAGCAGTATGAAAAAATGAGAATTGAAGCTGCTTCTATCAAAATCCAGAAGCATTGGCGAAGGTATTTTGCCCGATGTTGCTATAAAAAATTATGCTCTTCAGCTGTAGCTATTCAAGCTGGTATCCATGGTATGGTTGCTCTTAAAGAGCTTAAGTTTAGGAGGCAAACAAGAGCTGCAATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCTATATTCATTATTTGAGGATAAAAAAAGTTGCAATTACCGCACAATGTGCTATGAGAGGAAGAGTTGCACGCAAAGAACTTCATAAGCTTAAAATGGCTGCTAAGGAAACTGGTGCTCTCCAAGCTGCCAAAGATATGCTGGAGAAGCAAGTGGAAGAACTAACTTGGAGATTGCAGCAAGAGAAACAAATGAGGGCTGACATGGAGGAAGCCAAAACTCAAGAAAACACAAAATTGGAGTCTGCTTTGCAAGAAATGGAAACTCAATTTCAGGAAACAAAATCACTGCTTAATAAGGAACGTGAAGCTGCAAAGGAATTAGCTGAGCAAGCCCCAGTCATACAGGAGGTTCCCGTTGTTGATCATGAACTGATCAATAAGCTAACTGCTGAAATTGAACAATTGAAGGCTCTTGTAACTTCCTTGGCAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGGCTTAGTGAAGAGCGGCTGAAGCAGGCTCTGGAGGCAGAATCAAAGATAATAGAATTAAAAACTACCATGCAAAGGCTTGAGGAAAAATTATCTGACTTGGAAACTGAGGATAGAATTCTGAGGCAGCAAGCACTGCAGCAGCAAACACTGCAGCAACAAGCACTGCAAAAGCCTCCTTCAAGAAAAATGTCTGGACATATAGTAATGGCATCCAATCAGGTAGGCTTTCTGAAGAATTTTTCTATTATTAGTTCTCTTAGGTATCTATTGATCCTTTTGCTTTCATGTGTCTGCAGCCTTTGGAAAATGGCCACCATTGTTGATGCTCTATTGAAATGCCTGACACAGGATCTTGGGTTCAGTGAGGGAAAACCTGTCGGTGCTTTTATAATTTATAAATCTCTCCTCCATTGGAAGTCATTTGAAGCAGAAAAAACAAGTGTATTTGATCGGCTTATTCAGTTGATTGGTTCTGCGATTGAGAATCAGGATGATAATGAACACATGGCTTATTGGTTGTCCAACACAACTACATTGTTGTTCCTTCTCCAAAAGAGTTTAAAAGCCACGCCACGGAAGCCTCCCACCCCAACATCATTATTTGAGCGGATGACCCAAGGATTTCGTTCATCTTCTGCCAACCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTTGAGGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTTACAGCATATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTAAAGAAGGAACTATCGCCATTGCTTTCAACTTGTATTCAGGCTCCCGGATCTCCGAAAGAAAATAGTTTAGAACCATCTGGCGAGGAAAGTAGTAGTAGCCCTCCCAATAATTCTTGGAGCAGCATCATCGACAACCTCAATGATCATCTGTGTAGATTGCAGAATAACTTTGTACCTGCCGTTTTGGTTCAGAGGATATTCTCTCAGGTCTTTTCATATATTAACGTACAGCTCTTCAATAGTCTTCTACTTCGTCAAGAGTGCTGCACGTTTAGCATTGGAGACCATGTGAAGTCAGGATTGGCTGAGTTAGAGCTTTGGTGTGGCCAAGCAAAAGAAGAGTATGCTGGGTCATGTTGGGATGAGCTAAAACACGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTGAGCGTTCATCAGCTTTATAGAATATGTAATCTTTATTCGGACGACAATTTCAATACTATGAGTGTTGCTCCAGATGTTATTTCTAGCATGAAGGCTACAATGACCGAGGATTACAACGATGAGGACAGTAGTTCCTTTTTGTTGGATGACAATTCCAGTATACCTTTCTCAGTTGATGACATATCCACTTCCCTGCAAGATAAGAATTTTCACGATATAAAGCCTCCTGCAGAACTACTTGAGAATCCCGCCTTCCAATTTTTACAGGAT | 4602 | 40.53 | QAGQVNLVVGSLVWIEDPDVAWLDGEVVEVNGQDIKVLCTTGTTVEVKSASVYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKFRYDVNEIYTYTGSILIAVNPFRRLPHLYAHEMMEDYKGAALGELSPHPFAIANSAYRYSHISYIQMINEGISQSILVSGESGAGKTESTKMLMRYLAFVGGRAGGKSASGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSLRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEIEKYKLGNPRSFHYLNQSNCCELDGVDDSEEYLSTRKAMDVVGISTSDQDAIFRVVAAILHLGNVEFAKGKDVDSSEPKDDKSRFHLKMAAELFMCDEKSLEDSMCTRVIVTRDETITKCLDPDSATLSRDALAKIVYSRLFDWIVDTINNSIGQDPHSKHLIGVLDIYGFESFKTNRCLTGTLLLSLCFLVCIGLCSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIDFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLARTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCTFVSGLFPPLPEDSSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPSIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIARFKILAPDVLHGSCGESTACKRLLEKVNLKGYQIGKTKVFLRAGQMAQLDGCRTEVLGRAAIVIQKKVRSYLGRKKFILLRLSAVQIQAVCRGQVARQQYEKMRIEAASIKIQKHWRRYFARCCYKKLCSSAVAIQAGIHGMVALKELKFRRQTRAAIIIQSRCRQYLAYIHYLRIKKVAITAQCAMRGRVARKELHKLKMAAKETGALQAAKDMLEKQVEELTWRLQQEKQMRADMEEAKTQENTKLESALQEMETQFQETKSLLNKEREAAKELAEQAPVIQEVPVVDHELINKLTAEIEQLKALVTSLANKIDETERKFEESNRLSEERLKQALEAESKIIELKTTMQRLEEKLSDLETEDRILRQQALQQQTLQQQALQKPPSRKMSGHIVMASNQVGFLKNFSIISSLRYLLILLLSCVCSLWKMATIVDALLKCLTQDLGFSEGKPVGAFIIYKSLLHWKSFEAEKTSVFDRLIQLIGSAIENQDDNEHMAYWLSNTTTLLFLLQKSLKATPRKPPTPTSLFERMTQGFRSSSANLPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLLSTCIQAPGSPKENSLEPSGEESSSSPPNNSWSSIIDNLNDHLCRLQNNFVPAVLVQRIFSQVFSYINVQLFNSLLLRQECCTFSIGDHVKSGLAELELWCGQAKEEYAGSCWDELKHVRQAVGFLVIHQKSRISYDEITNDLCPILSVHQLYRICNLYSDDNFNTMSVAPDVISSMKATMTEDYNDEDSSSFLLDDNSSIPFSVDDISTSLQDKNFHDIKPPAELLENPAFQFLQD | 1534 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 957922 | 978365 | + | MC05g0135 | Mch5g0146 | 687565 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g0146 | 1534 | Gene3D | - | 766 | 815 | - | - | |
| Mch5g0146 | 1534 | Gene3D | - | 816 | 864 | - | - | |
| Mch5g0146 | 1534 | Gene3D | - | 865 | 913 | - | - | |
| Mch5g0146 | 1534 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 817 | IPR027417 | - | |
| Mch5g0146 | 1534 | PRINTS | Myosin heavy chain signature | 513 | 541 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | PRINTS | Myosin heavy chain signature | 156 | 181 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | PRINTS | Myosin heavy chain signature | 207 | 234 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | PRINTS | Myosin heavy chain signature | 460 | 488 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | Gene3D | - | 263 | 321 | - | - | |
| Mch5g0146 | 1534 | Gene3D | - | 450 | 654 | - | - | |
| Mch5g0146 | 1534 | FunFam | Myosin heavy chain | 263 | 318 | - | - | |
| Mch5g0146 | 1534 | CDD | MyosinXI_CBD | 1143 | 1503 | IPR037975 | GO:0007015(InterPro) | |
| Mch5g0146 | 1534 | FunFam | Myosin 2 | 323 | 441 | - | - | |
| Mch5g0146 | 1534 | Gene3D | - | 698 | 761 | - | - | |
| Mch5g0146 | 1534 | FunFam | Myosin XI D | 766 | 815 | - | - | |
| Mch5g0146 | 1534 | ProSiteProfiles | IQ motif profile. | 885 | 914 | - | - | |
| Mch5g0146 | 1534 | Gene3D | Kinesin motor domain | 65 | 693 | IPR036961 | - | |
| Mch5g0146 | 1534 | Coils | Coil | 1003 | 1037 | - | - | |
| Mch5g0146 | 1534 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | Pfam | DIL domain | 1356 | 1460 | IPR002710 | - | |
| Mch5g0146 | 1534 | Coils | Coil | 922 | 988 | - | - | |
| Mch5g0146 | 1534 | SMART | iq_5 | 765 | 787 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | SMART | iq_5 | 813 | 835 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | SMART | iq_5 | 861 | 883 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | SMART | iq_5 | 836 | 858 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | SMART | iq_5 | 884 | 906 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | SMART | iq_5 | 788 | 810 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | ProSiteProfiles | IQ motif profile. | 789 | 818 | - | - | |
| Mch5g0146 | 1534 | SMART | MYSc_2a | 56 | 764 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | SMART | DIL_2 | 1355 | 1462 | IPR002710 | - | |
| Mch5g0146 | 1534 | Pfam | IQ calmodulin-binding motif | 816 | 835 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | Pfam | IQ calmodulin-binding motif | 792 | 809 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | Pfam | IQ calmodulin-binding motif | 863 | 882 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | Pfam | IQ calmodulin-binding motif | 768 | 786 | IPR000048 | GO:0005515(InterPro) | |
| Mch5g0146 | 1534 | Pfam | Myosin head (motor domain) | 64 | 751 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | ProSiteProfiles | IQ motif profile. | 768 | 795 | - | - | |
| Mch5g0146 | 1534 | ProSiteProfiles | Dilute domain profile. | 1186 | 1480 | IPR002710 | - | |
| Mch5g0146 | 1534 | ProSiteProfiles | IQ motif profile. | 814 | 843 | - | - | |
| Mch5g0146 | 1534 | FunFam | unconventional myosin-Va | 864 | 912 | - | - | |
| Mch5g0146 | 1534 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 323 | 632 | - | - | |
| Mch5g0146 | 1534 | ProSiteProfiles | Myosin motor domain profile. | 62 | 763 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch5g0146 | 1534 | FunFam | Class V myosin | 471 | 615 | - | - | |
| Mch5g0146 | 1534 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 818 | 914 | IPR027417 | - | |
| Mch5g0146 | 1534 | CDD | MYSc_Myo11 | 76 | 751 | IPR036018 | - | |
| Mch5g0146 | 1534 | Coils | Coil | 1045 | 1079 | - | - | |
| Mch5g0146 | 1534 | PANTHER | MYOSIN | 13 | 1479 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Mch5g0146 | 1534 | MobiDBLite | consensus disorder prediction | 1303 | 1328 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g0146 | Mch-Chr5:957922 | Mch9g0029 | Mch-Chr9:253968 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch5g0146 | K10357 | - | csv:101221506 | 2503.01 |