Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0233 ATGTCTTTCGATCAATCAAGGCTTGATAACAATGAGGATCCTCAGTTTAAGAAATCCGCGCGATCATCGAGCTTAAATCAGCAGAGAATCTCTCATGGATTTCATTCTAAGCCGAGCGCTGCCGGAAGGTGTCCTACGCCGATCGTCTCCAACCACAGTGTTAAGAAGTCCAACGAGACACAACACGCACGGGAATCTAGGGCTGTTTTTTCGTCTGTAAATTCTGCCATTTCTACTACGCCTCAGGGAGGTCAAAATGGTTCTCATGTGCAGCCGCAGCTGAATGGTTCAGCATCCAATCCAATAAAATTGTCAGAATCCCAAAGCGGGATTTTAAAAAAGAATGCAACTTCTCAAACTACCTCAAAAACTTCTGATGCATTGTCAGAATCCAATGGCGGAATTGCTCAAAATAATGCAACTTCTAAACCTACCTCAAAAACTTCTCATACCAAGGCACCCTCGACGCCCTTTAAAGCTATAGTCTTTCAGTGTAATTACTGCTACCATTTGTTCAAATCTGTTCCTTCGGGGTCTGTACTGCCAGTACCCAAGCAACCATTACAGAAAAATGATTCCAGCGTCCGTGGTCAACCTAATAGTGGAAAATCCAATCCAGATCCTGAAACCAAAAGGGAGATGCAAGTCTCCTCAGGATCCCCCTTAAACCAGATTCAGAAGCCTTCCCATGTATCATTCATTAGTCACAGAGCTTCTATTTCACTCCCTGATAGTAATAGTATGAGCAGCCTGGTGCATCAAATTGCTAATTCACCTAATGTAAAAGAAGTCCAAGTTCATGGAGTGATCTCTGCTTCCTCAGCAACAAAGCATGTAGCAATCCAACTGCCGCATCAGGTTTCTGAAACTGTTCAAGCTTCAAAATCAAATGCTGCCAAGAGGGGAGGCACGCCCACTTCAAATAAAGTTTCTGGTGCAGAGTGTAGTGTTGATATTTCAGATCCCATTTGTTGTTCTAAGCTGGAGTCCCCTTTGCAAATTGAGCAATCAATGCATGAGCTCGTTGGAACAAAAAATGTATGGAGGAGAAAATTGCCTGGTTCTGTAGATGACATAGAACAAAGTAAACCTCCATCTTTCATGAAGTCAACAGCAATTAATAATGGCTACTCAAACTCAGAAACGCTGGGGAAATTGGATGAAACTGTGAATTTTCATGCAGAAGTTGACAGTACCCAAGACAATAACGTTCTTTCTAACTCTACAACTCATGGGTATAAGATTTCACTTATTCTTGCACCTTCTTGTGGAAGCAATAATAACTACAATACTGAAGTGGGCAGAGCTGATCTGCTGTCGGCTCCTGTGCCGACGTCTGAGCTCTCAGATATGAAGCATGAAGGAAATAGAATAGAGCATGCAGGTTTGCAGTGTGATCCTAAGCATAAACCTGTTGTGGACACAAACAAGATGAGGAATACGTCTTCAAGAGGAAAGAAGAAGAGAAAGGAAATTCTTCAGAAGGCAGATGCTGCTGGGACTACTTCTGACCTTTATATGGCATACAAAGAACCTGAACAAAAGAAAGAGACTGTCATGTCTGCTGAAAGCTCCAATGGAGGCTTAAATATGAAGCACGAGTCTGCTGCTTCCATTAAGGAAGAGGCTGTCTTGACCAAGCAGAGTAAATTTGAGCCAGATGATTGGGAAGATGCAGTTGATATTTCTTCTGGGAATTACGAGGGTTTTGAGGACAAGGCCAAAGGAAAAGTAGCACTGCATCACGAGGATGGGAGTGGAGATATGGCCAAAAAGTACTCCAGAGATTTCCTCCTGAATTTTGCAGAGCAGTTCATGGACCTTCCCGATGGGTTTGAAATTACTCCCAGTATGAAGACTTTAATGAGTATTAACGGTTGCTCTCGTTCTGTTAATAGTAATTCATATGCTAATCTTGGAAAAATGGATAGGCCAAGTGGAGGGTCTCGACTAGACCATCGTGCTATTGGTGTTGATGCTTCAGGGCGGAATTCAAACCTGGAAAGTGCTTATTTAGCTGATTCTGGCTCTCGACCTACCCAGGGTGCTATCGGTGGTGCTTTAAAGAACACAAGGGCACACATAGGTTCCCAGGGAAAGATTCAAAGAAATGGCTCCAGTACTGATAGGTGGCAAAGAGATACCAACTTTCAGATGAAAGGTTTAATTTCTCCTCCAACTCCATTACAGATGATGCACAGAGCCGAGAAGAAATATGAAGTGGGTAAAGTGGCTGACGAGGAAGAGACCAAACAAAGGCAGCTGAAGGCTATACTAAACAAGCTAACTCCACAAAATTTTGCAAAACTCTTTGAACAAGTGAAAGCAGTTAATATTGATAGCGCTAAGACACTAACTGGTGTCATCTCTCAGATCTTTGACAAAGCTTTGACGGAACCCACTTTCTGTGAAATGTATGCCAATTTTTGTCTCCATCTGGCTGGTGATTTACCAGATTTTAGCGATGATAATCAGAAGATTAATTTCAAGAGGTTGCTTTTAAACAAGTGCCAGGAGGAATTTGAGAGAGAGCAGGAAGAAAATGATAACGTTAATAAGGTCGGTGAGACGAAACAGTCTGAAGAGGAACAAGAAGCGAAGAGAACAAAGGCGCGCAGAAGAATGCTAGGAAACATCAGATTAATTGGGGAACTTTACAAAAAAAAGATGATAACAGAGAAAATCATGCATGTATGCATCAAGAAATTGTTGGGTCAATATCAAAATCCCGATGAGGAGGATATTGAAGCATTGTGCAAACTGATGAGCACCATAGGAGAGATGATAGATCACTCCAAAGCTAAGCAGCACATGGATGCATATTTTGAGATGATGACTGAATTATCAAATAACATGAAGTTGTCATCAAGGGTTAGATTCATGTTGAAGGATGCAATTGATCTGAGAAAGAACAAATGGCAACAAAGGAGAAAAATCGAAGGTCCCAAAAAAATTGATGAAGTGCACAGGGACGCTGTGCAAGAACGTCAAGCACAAACTAGTAGATTAGGCCGTGGTCCTGGAACCAATGCATCATTGAGAAGAGGAACATCCATGGATTTTGGTTTTAGAGCGTCTGCACTATTGCCTTCTCCCAATGCCCAGATTGGTGGTTCAAGCAGTCAAGACACTCGTTTTGAAGGTAAACAACAATCTTCCGAAGCCAGGGCATTTCCAACTCCATTGCACCAAAGACCTATTAGTGATGATGCCATCACTTTGGGTCCACAGGGTAGTTTAGCAAGAGGGATGTCCATTAGAGGGCCACGATCTGTTTCATCCTCTTCATTACCAGATGTGTCCTTGCCGGCTGCTGGTAACTCCCAAAGAATTACAGCTCATGGCTCAGTATCAGAGCATGCAACTTCCAATTCCAGAGGGGGTATCACTGTAAGAAATAATATGTCAAAGGGATTTGCAGGTTCAGTATCTCCTGATCAAGCGAGCACACAGGAGCCTGGTACTATTAATGGATGTACACAATCGGGAAACATTGATAGCAGTCTTGGTAGGTCTCAATCAATCTCGCCGACCAAACGTGAGCAACCAGCTTTGACACGTAATGGTCATTCTGAAGTTATGTCCGAAGAACGTCTACGAGAAAAATCCGTAGCAGCGATTAGGGAATACTACAGTGCTAGAGATGAGAAAGAAGTTACTCTGTGCATCAAGGAGTTGAATTCGCCTGGATTCTATTCATCCATGATTTCTCTTTGGATCACAGACTCATTTGAGAGGGAAACCAAAGAAAGGGATCTTTTAGCAAAACTACTTGTTAGCCTCGCAAAATCAAAGAATGCTACATTTACTCAACTCCAACTTGTCAAAGGGATCGAGTATGTTCTTGCCACTCTGGAGGATGCTGTCAACGATGCCCCGAAAGCTCCAGAATTTATGGGGCGACTACTGGCGAACTTGATCTGGGAAGACTTGATTCCATTGAAAGAAATCGGGAAGCTCATATATGAAGGTGGGGAGGAGCCTGGAAGTCTTGTACAAGTTGGGGTTGCAGCTGATGTTCTTGGCAACGTGTTGGAGGCAGTTCAATTGGAGAAAGGTCAGATTTTTGTGAACCAAATTCTTAAAAGTTCTAATCTACAACTGGAAACGTTTCTCCCTTCATACCCAATCAAACTCAAATCAACAAAACTAGAGAAATTTATTTAG 4167 42.5 MSFDQSRLDNNEDPQFKKSARSSSLNQQRISHGFHSKPSAAGRCPTPIVSNHSVKKSNETQHARESRAVFSSVNSAISTTPQGGQNGSHVQPQLNGSASNPIKLSESQSGILKKNATSQTTSKTSDALSESNGGIAQNNATSKPTSKTSHTKAPSTPFKAIVFQCNYCYHLFKSVPSGSVLPVPKQPLQKNDSSVRGQPNSGKSNPDPETKREMQVSSGSPLNQIQKPSHVSFISHRASISLPDSNSMSSLVHQIANSPNVKEVQVHGVISASSATKHVAIQLPHQVSETVQASKSNAAKRGGTPTSNKVSGAECSVDISDPICCSKLESPLQIEQSMHELVGTKNVWRRKLPGSVDDIEQSKPPSFMKSTAINNGYSNSETLGKLDETVNFHAEVDSTQDNNVLSNSTTHGYKISLILAPSCGSNNNYNTEVGRADLLSAPVPTSELSDMKHEGNRIEHAGLQCDPKHKPVVDTNKMRNTSSRGKKKRKEILQKADAAGTTSDLYMAYKEPEQKKETVMSAESSNGGLNMKHESAASIKEEAVLTKQSKFEPDDWEDAVDISSGNYEGFEDKAKGKVALHHEDGSGDMAKKYSRDFLLNFAEQFMDLPDGFEITPSMKTLMSINGCSRSVNSNSYANLGKMDRPSGGSRLDHRAIGVDASGRNSNLESAYLADSGSRPTQGAIGGALKNTRAHIGSQGKIQRNGSSTDRWQRDTNFQMKGLISPPTPLQMMHRAEKKYEVGKVADEEETKQRQLKAILNKLTPQNFAKLFEQVKAVNIDSAKTLTGVISQIFDKALTEPTFCEMYANFCLHLAGDLPDFSDDNQKINFKRLLLNKCQEEFEREQEENDNVNKVGETKQSEEEQEAKRTKARRRMLGNIRLIGELYKKKMITEKIMHVCIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHSKAKQHMDAYFEMMTELSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKIEGPKKIDEVHRDAVQERQAQTSRLGRGPGTNASLRRGTSMDFGFRASALLPSPNAQIGGSSSQDTRFEGKQQSSEARAFPTPLHQRPISDDAITLGPQGSLARGMSIRGPRSVSSSSLPDVSLPAAGNSQRITAHGSVSEHATSNSRGGITVRNNMSKGFAGSVSPDQASTQEPGTINGCTQSGNIDSSLGRSQSISPTKREQPALTRNGHSEVMSEERLREKSVAAIREYYSARDEKEVTLCIKELNSPGFYSSMISLWITDSFERETKERDLLAKLLVSLAKSKNATFTQLQLVKGIEYVLATLEDAVNDAPKAPEFMGRLLANLIWEDLIPLKEIGKLIYEGGEEPGSLVQVGVAADVLGNVLEAVQLEKGQIFVNQILKSSNLQLETFLPSYPIKLKSTKLEKFI 1388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1545586 1552042 - MC05g0216 Mch5g0233 687652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0233 1388 MobiDBLite consensus disorder prediction 1029 1198 - -
Mch5g0233 1388 SUPERFAMILY ARM repeat 1194 1376 IPR016024 -
Mch5g0233 1388 ProSiteProfiles MI domain profile. 1198 1322 IPR003891 -
Mch5g0233 1388 SMART if4_15 752 972 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch5g0233 1388 MobiDBLite consensus disorder prediction 64 153 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 1032 1058 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 466 496 - -
Mch5g0233 1388 Gene3D - 752 985 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 994 1016 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 291 312 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 1 153 - -
Mch5g0233 1388 FunFam Eukaryotic translation initiation factor 4G 752 985 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 184 225 - -
Mch5g0233 1388 SMART ma3_7 1199 1313 IPR003891 -
Mch5g0233 1388 Gene3D - 1190 1388 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 844 870 - -
Mch5g0233 1388 Pfam MIF4G domain 753 972 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Mch5g0233 1388 SUPERFAMILY ARM repeat 745 974 IPR016024 -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 183 225 - -
Mch5g0233 1388 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 149 1375 IPR045208 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0016281(PANTHER)
Mch5g0233 1388 MobiDBLite consensus disorder prediction 997 1016 - -
Mch5g0233 1388 Coils Coil 827 854 - -
Mch5g0233 1388 Pfam MA3 domain 1199 1313 IPR003891 -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 1088 1184 - -
Mch5g0233 1388 MobiDBLite consensus disorder prediction 17 34 - -
Mch5g0233 1388 FunFam Eukaryotic translation initiation factor 4G 1192 1387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0492 Mch-Chr11:3121521 Mch5g0233 Mch-Chr5:1545586 7.31E-53 dispersed
Mch5g0233 Mch-Chr5:1545586 Mch6g0611 Mch-Chr6:4157615 1.63E-46 dispersed
Mch5g0233 Mch-Chr5:1545586 Mch7g0816 Mch-Chr7:12776547 3.23e-319 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0233 K03260 - csv:101222372 1714.89