Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0237 ATGTTCCGACGAGCTTCAAGCCTTTTGGCCCGCCCTCTTCGCTCTGCCAGGGCCAGATCCTTCTCCACCGATCTGCCGGCGGCTTCCTCCCCCGACGAGGCCTTTGTCGAGACATGGAAGAAGATGATCCCTAATATTGATCCTCCCAAAACTCCGCTCTCCTTCATGGCTCCTCGTCCCGCTACGCCTTCTTCCATTCCTACTAAGCTCACTGTCAACTTCGTGCTTCCCTATGCCTCGGAGCTCTCGTCCAAAGAGGTTGACATGGTAATAATTCCAGCGACAACTGGGCAAATGGGTGTTCTCCCTGGTCATGTAGCTACAATTGCAGAATTGAAGCCAGGGGTTCTATCAGTTCACGAGGGGAGTGATGTGAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCGTTCATGGCAACTCGTTTACTGACATAATTGCTGTCGAAGCTGTGCCTGTAGATCAAATTGACGCTAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAGCTCTGCCTCAACAGACTTGGAGAAAGCAGAGGCCCAAATCGGAGTCGACGTGCACAGTGCCCTGAATTCCGCCCTTACAGGATAG 603 51.91 MFRRASSLLARPLRSARARSFSTDLPAASSPDEAFVETWKKMIPNIDPPKTPLSFMAPRPATPSSIPTKLTVNFVLPYASELSSKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDVKKYFVSSGFAFVHGNSFTDIIAVEAVPVDQIDASQVQKGLAEFTQKLSSASTDLEKAEAQIGVDVHSALNSALTG 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1573433 1576397 - MC05g0220 Mch5g0237 687656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0237 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Mch5g0237 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Mch5g0237 200 Gene3D - 58 156 IPR036771 -
Mch5g0237 200 Gene3D - 157 199 - -
Mch5g0237 200 Coils Coil 165 185 - -
Mch5g0237 200 FunFam ATP synthase subunit delta 157 199 - -
Mch5g0237 200 FunFam ATP synthase delta 59 156 - -
Mch5g0237 200 NCBIfam ATP synthase F1 subunit epsilon 81 185 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Mch5g0237 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Mch5g0237 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 143 IPR020546 GO:0015986(InterPro)
Mch5g0237 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 28 200 IPR001469 GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(PANTHER)|GO:0046933(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0237 K02134 - csv:101206104 335.495