Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0259 ATGAATGAAATGATAGAGGAGATGGAGCAGCAACTTCCGAATGGAAGTGGAGCCGATGCAGTTTTACATCTTCGGACAAACTCCTCCATTTCTATTGCATATCATTCACTCTTTGGTCCACATGATGATTTAGTCCTCCTTGAGGTCGACGAAAAGCTTCTGGAAGAAGTTCTCCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCCGTCTTTTGCACTAAGTCAAAAACTTATGGAATCAAATATGTTGGAACTTCCAATTCTGTACTCCTCATACCCCCATCAGGTCGTTTGGAATATTATGAGAATGATCTTGATAGCCATGGGAAGGATAGCAGTAGGAAAGTTGCATCTGTGATCAAAGTTGCTCCTGGCATCATGGAACTTGTTGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTAGCCGATGAGTGGGAAAGCGATGAGGTGGACAAATATGAAAAAAAGCTGTATAATTGGGATGATCTTATCAACAAGATTCAAGCTAGCGATGATGAAATGAAAGCCGGATTACAAGAACTTTCTGCGGTTGAGATTGACGGGTACTGGAGAGTTGTGGATGAAAAATACATGGACTCCATACTACAGATGCTTTTGCATAACGCAGTTTTGAATGACTGGTCACTGGACGCACTTAATGAAAATGAAGTTATGAAAGTTATGGAAGTAGATGGCTTTCCTGAAAAGCTTGTGCGTCATTGTCTCCATGTTTATGGCGATAAATTGGATGAAGATGAGTGCAAGAGCTGTTTATGGAGATTGGACCAAAAACGGGTATGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAGGGAAAGATGAAGTTGGAGAGTTTCATGGATGAATGGACACGGAAAATCCCACTAGGAATGCGTGCTGTCTTTGACCTGTTGGAAGGTGAAGTTCTGACTGAGAGGATCGGTGTCGAGACATGGGTTCGCGGTTTCAGAGTTTCTTCATTGCCATCAAATCCCGCTGAGCGTTTCTCCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAGGATCTGCAGCCCTACATCAGGGATCTTACCGTTCCAGGTCTTTCATCAGAGGGTTTGCTTCTGAAATACACCCGAAGAACCCAACCGAACCCCAATTCAGAACCTGTGTTCAGTGCAAGATGA 1203 43.23 MNEMIEEMEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPEKLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1734676 1737414 + MC05g0242 Mch5g0259 687678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0259 400 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 19 400 IPR019128 GO:0000775(PANTHER)|GO:0000785(PANTHER)|GO:0007064(InterPro)|GO:0031390(PANTHER)|GO:0031390(InterPro)|GO:0034088(PANTHER)
Mch5g0259 400 Pfam Sister chromatid cohesion protein Dcc1 45 366 IPR019128 GO:0007064(InterPro)|GO:0031390(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0259 K11271 - csv:101203202 677.552