Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g0268 | ATGGAGTTGAGTTGGGCTGTGGCGGTGGCGGCGGTGGCGACCGCCGGCCTGGTGGCGGCGAAATGGCTGCTGAAGAGCGTGAATGTGTGGCTTTACGAGGCCAAATTGGGGCACCGGCGGCTGGCTCTGCCGCCGGGGGATTTGGGGTGGCCCTTTGTTGGGAATATGTTTGCTTTCTTTAGAGCCTTCAAGTCTACCAACCCTGAAACTTTCATTGATAGCTATGTTTCAAGGTACGGTAAAACCGGAGTATACAAGGCTCATTTGTTTGGAAACCCTAGCGTGATCGCGACGACGGCGGAAACATGCAGAAAGGTTTTGACAGACGACGAAGCTTTTCAACCTGGCTGGCCACGCGCCGCCGTGGAGCTCATCGGAAAGAAGTCGTTCATCGAAATGCCGCCGGAAGAACACAAGCGCCTCCGACGCTTAACCTCTGCTCCGGTCAACGGCTTCGAGGCCTTGAGCAATTACATTCCCTACATTGAAGAGAATGTCTTGGCTTCGTTGGAGAAATGGTCAAAGATGGGGAAAATCGAATTCTTAACTCAACTTCGAAAGCTCACTTTCACTATTATTATGTACATTTTCCTCAGCAGCGAGAGTGAAGATGTAATGGAGGCATTGGAGAAGGAATACACTAAGCTCAACTATGGTGTTCGAGCCCTGAGAATTAACCTTCCTGGATTTGCTTACCACAGAGCACTGAAGGCTCGGAAGAAACTCGTGGATACGCTGCAGTCAATTGTGAGTGATCGAAGAAGCCGAAAATTGGACAAATTGTACACGAAGAGGAAGGACATGATGGACGCTCTGATTGATGTGGAAGATGAAAATGGCAGAAAATTGACCGACGAGGAAATCATTGATATTCTGATCATGTACTTGAATGCAGGTCATGAATCTTCGGGCCACACCATGATGTGGTCAACCATTTTGTTGAATCAACACCCAGAAGTCCTGAAGAAAGCCAAGGCAGAGCAGGAGGAGATTGTGAGGAGGAGGCCTGCAAATCAAAAGGGATTAACATTAAGAGAATGCAGGGATATGGAATATCTCTCAAAAGTGGTCGATGAAACCCTTCGCTATGTATCATTCTCCCTCGTTGTTTTCAGAGAGGCGCAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGCTGGAAAGTTCTGGCCTGGTTCAGGGGCATTCACTATGACCCTGAAATCTACCCAGATCCAAAGAAATTTGACCCTTCCAGATGGGATGGATTCATACCGAAAGCAGGGGAGTTTCTTCCCTTCGGAGCAGGAAGCAGGCTGTGCCCAGGGAATGATCTAGCCAAGTTGGAGATCTGCATTTTCGTCCACTATTTCCTCCTCAATTACAAGCTAGAATGGTTGAACCCTGAAGGTTCAATCTTGTTTCTGCCGCACTCAAGGCCAAAAGACAACTGCTTGGCAATAATCAGCAAGAATCCGAGCTTGGCTGCTTGA | 1479 | 48.34 | MELSWAVAVAAVATAGLVAAKWLLKSVNVWLYEAKLGHRRLALPPGDLGWPFVGNMFAFFRAFKSTNPETFIDSYVSRYGKTGVYKAHLFGNPSVIATTAETCRKVLTDDEAFQPGWPRAAVELIGKKSFIEMPPEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLASLEKWSKMGKIEFLTQLRKLTFTIIMYIFLSSESEDVMEALEKEYTKLNYGVRALRINLPGFAYHRALKARKKLVDTLQSIVSDRRSRKLDKLYTKRKDMMDALIDVEDENGRKLTDEEIIDILIMYLNAGHESSGHTMMWSTILLNQHPEVLKKAKAEQEEIVRRRPANQKGLTLRECRDMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRGIHYDPEIYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFVHYFLLNYKLEWLNPEGSILFLPHSRPKDNCLAIISKNPSLAA | 492 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1823513 | 1829562 | + | MC05g0251 | Mch5g0268 | 687687 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g0268 | 492 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g0268 | 492 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | Pfam | Cytochrome P450 | 44 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | Gene3D | Cytochrome P450 | 34 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | FunFam | Ent-kaurenoic acid oxidase | 34 | 487 | - | - | |
| Mch5g0268 | 492 | CDD | CYP90-like | 76 | 486 | - | - | |
| Mch5g0268 | 492 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | SUPERFAMILY | Cytochrome P450 | 38 | 480 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0268 | 492 | PANTHER | CYTOCHROME P450 26 | 42 | 457 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch4g0691 | Mch-Chr4:4614509 | Mch5g0268 | Mch-Chr5:1823513 | 9.94E-77 | dispersed | |
| Mch5g0268 | Mch-Chr5:1823513 | Mch6g2155 | Mch-Chr6:23928659 | 1.84E-154 | dispersed | |
| Mch10g1631 | Mch-Chr10:16440000 | Mch5g0268 | Mch-Chr5:1823513 | 1.37E-153 | wgd | |
| Mch5g0268 | Mch-Chr5:1823513 | Mch6g2152 | Mch-Chr6:23900365 | 4.49E-44 | wgd | |
| Mch5g0268 | Mch-Chr5:1823513 | Mch7g0797 | Mch-Chr7:12617416 | 1.85E-251 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch5g0268 | K04123 | - | csv:101221667 | 858.596 |