Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0268 ATGGAGTTGAGTTGGGCTGTGGCGGTGGCGGCGGTGGCGACCGCCGGCCTGGTGGCGGCGAAATGGCTGCTGAAGAGCGTGAATGTGTGGCTTTACGAGGCCAAATTGGGGCACCGGCGGCTGGCTCTGCCGCCGGGGGATTTGGGGTGGCCCTTTGTTGGGAATATGTTTGCTTTCTTTAGAGCCTTCAAGTCTACCAACCCTGAAACTTTCATTGATAGCTATGTTTCAAGGTACGGTAAAACCGGAGTATACAAGGCTCATTTGTTTGGAAACCCTAGCGTGATCGCGACGACGGCGGAAACATGCAGAAAGGTTTTGACAGACGACGAAGCTTTTCAACCTGGCTGGCCACGCGCCGCCGTGGAGCTCATCGGAAAGAAGTCGTTCATCGAAATGCCGCCGGAAGAACACAAGCGCCTCCGACGCTTAACCTCTGCTCCGGTCAACGGCTTCGAGGCCTTGAGCAATTACATTCCCTACATTGAAGAGAATGTCTTGGCTTCGTTGGAGAAATGGTCAAAGATGGGGAAAATCGAATTCTTAACTCAACTTCGAAAGCTCACTTTCACTATTATTATGTACATTTTCCTCAGCAGCGAGAGTGAAGATGTAATGGAGGCATTGGAGAAGGAATACACTAAGCTCAACTATGGTGTTCGAGCCCTGAGAATTAACCTTCCTGGATTTGCTTACCACAGAGCACTGAAGGCTCGGAAGAAACTCGTGGATACGCTGCAGTCAATTGTGAGTGATCGAAGAAGCCGAAAATTGGACAAATTGTACACGAAGAGGAAGGACATGATGGACGCTCTGATTGATGTGGAAGATGAAAATGGCAGAAAATTGACCGACGAGGAAATCATTGATATTCTGATCATGTACTTGAATGCAGGTCATGAATCTTCGGGCCACACCATGATGTGGTCAACCATTTTGTTGAATCAACACCCAGAAGTCCTGAAGAAAGCCAAGGCAGAGCAGGAGGAGATTGTGAGGAGGAGGCCTGCAAATCAAAAGGGATTAACATTAAGAGAATGCAGGGATATGGAATATCTCTCAAAAGTGGTCGATGAAACCCTTCGCTATGTATCATTCTCCCTCGTTGTTTTCAGAGAGGCGCAAATGGATGTCAACCTCAATGGTTATCTAATTCCCAAGGGCTGGAAAGTTCTGGCCTGGTTCAGGGGCATTCACTATGACCCTGAAATCTACCCAGATCCAAAGAAATTTGACCCTTCCAGATGGGATGGATTCATACCGAAAGCAGGGGAGTTTCTTCCCTTCGGAGCAGGAAGCAGGCTGTGCCCAGGGAATGATCTAGCCAAGTTGGAGATCTGCATTTTCGTCCACTATTTCCTCCTCAATTACAAGCTAGAATGGTTGAACCCTGAAGGTTCAATCTTGTTTCTGCCGCACTCAAGGCCAAAAGACAACTGCTTGGCAATAATCAGCAAGAATCCGAGCTTGGCTGCTTGA 1479 48.34 MELSWAVAVAAVATAGLVAAKWLLKSVNVWLYEAKLGHRRLALPPGDLGWPFVGNMFAFFRAFKSTNPETFIDSYVSRYGKTGVYKAHLFGNPSVIATTAETCRKVLTDDEAFQPGWPRAAVELIGKKSFIEMPPEEHKRLRRLTSAPVNGFEALSNYIPYIEENVLASLEKWSKMGKIEFLTQLRKLTFTIIMYIFLSSESEDVMEALEKEYTKLNYGVRALRINLPGFAYHRALKARKKLVDTLQSIVSDRRSRKLDKLYTKRKDMMDALIDVEDENGRKLTDEEIIDILIMYLNAGHESSGHTMMWSTILLNQHPEVLKKAKAEQEEIVRRRPANQKGLTLRECRDMEYLSKVVDETLRYVSFSLVVFREAQMDVNLNGYLIPKGWKVLAWFRGIHYDPEIYPDPKKFDPSRWDGFIPKAGEFLPFGAGSRLCPGNDLAKLEICIFVHYFLLNYKLEWLNPEGSILFLPHSRPKDNCLAIISKNPSLAA 492
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 1823513 1829562 + MC05g0251 Mch5g0268 687687
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0268 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch5g0268 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 Pfam Cytochrome P450 44 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 Gene3D Cytochrome P450 34 486 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 FunFam Ent-kaurenoic acid oxidase 34 487 - -
Mch5g0268 492 CDD CYP90-like 76 486 - -
Mch5g0268 492 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 SUPERFAMILY Cytochrome P450 38 480 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch5g0268 492 PANTHER CYTOCHROME P450 26 42 457 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0691 Mch-Chr4:4614509 Mch5g0268 Mch-Chr5:1823513 9.94E-77 dispersed
Mch5g0268 Mch-Chr5:1823513 Mch6g2155 Mch-Chr6:23928659 1.84E-154 dispersed
Mch10g1631 Mch-Chr10:16440000 Mch5g0268 Mch-Chr5:1823513 1.37E-153 wgd
Mch5g0268 Mch-Chr5:1823513 Mch6g2152 Mch-Chr6:23900365 4.49E-44 wgd
Mch5g0268 Mch-Chr5:1823513 Mch7g0797 Mch-Chr7:12617416 1.85E-251 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0268 K04123 - csv:101221667 858.596