Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0285 CTTTCAAAAAACCCCACATCCCATTTTCCCCTTCACCACCCGAATCTCCGATCGAAATCCCCCAAACGCGCCCAATTCTCCACCTCCACCGCCATTAATGGCGTCTTCTCAAAACCCTCTTTCCAGATTCCCAAATCGAGCGGATTCTGCAAATTTCCCGCGAACCCATTTAGGTTTTCTCCGCCCGCGGCCGCCGCCGAGGACGCCGGCGATGCCTCCGACGATTCGTCCTCCAAGGCCAAAACCCTTCAGCTCGCCGTTGTGTTCGGGCTCTGGTACTTCCAGAACATCGTCTTCAACATCTACAACAAGAAGGTTCTCAATATCTTCCCCTTTCCATGGCTTCTCGCTTCGTTTCAGCTCTTCGCTGGATCGATTTGGATGCTGGTTCTCTGGTCTTTGAAGCTGCAACCGTGCCCTAAAATTTCAAAGCCCTTCATAATCGCTCTCCTCGGCCCCGCTTTGTTCCACACAATCGGCCACATCTCCGCTTGCGTTTCCTTCTCCAAAGTCGCCGTCTCATTCACCCACGTCATTAAATCGGCGGAACCAGTCTTCACAGTCTTATTCTCCTCGTTCCTCGGCGATTCGTACCCTCTCAAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGCTGCTCTCTGGCCGCCATTACCGAAGCTTCCTTCAATTTCGAAGGTCTCTCCGGCGCCATGATCAGTAACGTGGGATTTGTTCTAAGAAACATCTACTCCAAGAGGAGCTTGCAGAATTTCAAGGAGGTTAATGGGTTGAATCTGTATGGGTGGATTAGCATAATTTCATTGTTTTATCTGTTTCCTGTGGCGATTTTTGTTGAAGGGTCGAAATGGGTTCAAGGGTATCATCAGGCGATTGCCTCCATTGGACAGGCATCAACATTATACATCTGGGTTTTGATTTCTGGAATCTTTTATCATCTTTACAATCAATCTTCTTACCAAGCTTTGGATGAAATCAGTCCTCTGACATTCTCTGTGGGGAATACGATGAAGAGAGTGGTTGTGATTGTGTCGTCTGTTTTGGTTTTTAGAAACCCCATTAGACCTCTGAATGCTGTTGGTTCTGCCATTGCCATTTTAGGGACTTTTCTGTATTCGCAGACTACGACGAAAAAGAGTGCTAAGAAGATCGAGGAGGGCGAGAAGAAGGAT 1173 48.25 LSKNPTSHFPLHHPNLRSKSPKRAQFSTSTAINGVFSKPSFQIPKSSGFCKFPANPFRFSPPAAAAEDAGDASDDSSSKAKTLQLAVVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFTVLFSSFLGDSYPLKVWLSILPIVFGCSLAAITEASFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLFYLFPVAIFVEGSKWVQGYHQAIASIGQASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPIRPLNAVGSAIAILGTFLYSQTTTKKSAKKIEEGEKKD 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1948274 1949446 + MC05g0265 Mch5g0285 687704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0285 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 265 374 - -
Mch5g0285 391 Pfam Triose-phosphate Transporter family 83 373 IPR004853 -
Mch5g0285 391 PANTHER SOLUTE CARRIER FAMILY 35 79 375 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Mch5g0285 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 83 382 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch5g0285 391 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1770 Mch-Chr1:18083541 Mch5g0285 Mch-Chr5:1948274 3.96E-109 dispersed
Mch3g1442 Mch-Chr3:16764088 Mch5g0285 Mch-Chr5:1948274 9.75E-74 dispersed
Mch4g2209 Mch-Chr4:23756225 Mch5g0285 Mch-Chr5:1948274 5.54E-73 dispersed
Mch5g0285 Mch-Chr5:1948274 Mch9g2077 Mch-Chr9:21833395 1.26E-72 dispersed
Mch5g0285 Mch-Chr5:1948274 Mch11g1168 Mch-Chr11:8215615 4.13E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0285 K15283 - csv:101219051 623.624