Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch5g0313 ATGTACTCCGAAGCTCAAGCTCAGCAGAAAAGCTCTGACGATTCGTCGACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCAGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAATCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTGGGAGAGGAGAACACTTAAGTCCAGATTTTGAGCGCCTAAATCCACTTAAATATGTTCCTATATTAGTAGATGGTCCAGTGGTAGTTTCGGACTCTTACGCGATATTTCTGTATTTGGAAGAGAAGTATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCATTCAAAATGTCTGAATCTGCAAGTGGCAAGTATCGTCAGCTCAAGCATACAACCTCTTCAAATGATAGGACTGCTGAAAACTATGGAGGAAAAATTTGGTCTAGAAGAACAACTACCATGGGCTCAGTCTAATATAGAAAAAGGTTTCAAGGCTCTTGAGAAACTACTGCAGGGCTTTTCTGGCCGATATGCCTTTGGAGATGAAGTATATATGGGTGATGTATTTTTGGCCCCTCAGATTTCAGTTGCTATTGGGAGGTACAACATTGACATGTCCAAGTTTCCTGTTCTAGCGAGGATTTACGAAGCTTACAAGACGTTACCGGAATTCCAAGCCTCGTCACCAGAAAGGCAACCCGACGCCTTTCATTAG 693 44.3 MYSEAQAQQKSSDDSSTSSKLVLYSFWQSSCSWRVRFALNLKGLSYEYRAVNLGRGEHLSPDFERLNPLKYVPILVDGPVVVSDSYAIFLYLEEKYPQKALLPADLHSKCLNLQVASIVSSSIQPLQMIGLLKTMEEKFGLEEQLPWAQSNIEKGFKALEKLLQGFSGRYAFGDEVYMGDVFLAPQISVAIGRYNIDMSKFPVLARIYEAYKTLPEFQASSPERQPDAFH 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2124250 2128265 - MC05g_new0026 Mch5g0313 687732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch5g0313 230 CDD GST_C_Zeta 106 225 IPR034330 -
Mch5g0313 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 19 100 IPR004045 -
Mch5g0313 230 CDD GST_N_Zeta 21 93 IPR034333 -
Mch5g0313 230 FunFam Glutathione S-transferase Z1 19 103 - -
Mch5g0313 230 SFLD Glutathione Transferase (cytosolic) 21 211 IPR040079 -
Mch5g0313 230 PANTHER MALEYLACETOACETATE ISOMERASE 19 228 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Mch5g0313 230 FunFam Maleylacetoacetate isomerase 104 230 - -
Mch5g0313 230 Gene3D Glutaredoxin 23 99 - -
Mch5g0313 230 NCBIfam maleylacetoacetate isomerase 23 228 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Mch5g0313 230 SUPERFAMILY GST C-terminal domain-like 101 228 IPR036282 -
Mch5g0313 230 SFLD Main (cytGST) 21 211 - -
Mch5g0313 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 105 229 IPR010987 -
Mch5g0313 230 Pfam Glutathione S-transferase, N-terminal domain 23 99 IPR004045 -
Mch5g0313 230 Gene3D - 102 230 - -
Mch5g0313 230 SUPERFAMILY Thioredoxin-like 19 103 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1536 Mch-Chr2:11872323 Mch5g0313 Mch-Chr5:2124250 1.80E-83 dispersed
Mch2g1538 Mch-Chr2:11898742 Mch5g0313 Mch-Chr5:2124250 1.46E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch5g0313 K01800 - csv:101213403 353.214