Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0318 | ATGAGCACGGGGCGCAGTGGAGGAAGTTGCACAGGCGGCAATGGGGGAGGCAGTGGACCTTGCGGTGCGTGTAAGTTTCTGCGGAGGAAGTGTCTGCCTGGGTGTATATTTGCACCCTACTTCGACTCCGAACAGGGCACGGCTCATTTTGCAGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTATCGAAGCTGCTTTTACATATTCCAGAACACAAGCGGCTTGACGCTGCTATAACCATATGCTATGAAGCTCAAGCTCGGGTCAGAGAGCCAGTTCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAAGAACAGGCAGCGAGGTTGCGAGCTGAGCTCTCATACTTACAAGCATACCTAGCAGCATCCGAGCTTCGAAGACCCCAATCCAATCTACAGGCACAGCCACCACCTCTGATTAAGCCATCTCTACCCTCAATTTCAAACCTGCCATTAGATTCCCCCTCCTTGCCCGTTTCATCGGATCTTTCCCTACTGCTCGATCCTGTGGTGCAAGCTTCAGGATCAAAACCGCAGTCTCCATTCGAATCATGTCAAATTGGAAGCAACAATTTCCCATCCATGGCCGGCAGGGATCAACAACTCATTTACAAACAACTGTCCTCAATGCAGTGTATTGGTGCCTCCTTATTTCCATACCTCCCAAAACGAGCCTAA | 681 | 50.81 | MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQSPFESCQIGSNNFPSMAGRDQQLIYKQLSSMQCIGASLFPYLPKRA | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2165835 | 2168496 | + | MC05g0289 | Mch5g0318 | 687737 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0318 | 226 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 17 | 137 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Mch5g0318 | 226 | Pfam | Lateral organ boundaries (LOB) domain | 20 | 118 | IPR004883 | - | |
Mch5g0318 | 226 | ProSiteProfiles | LOB domain profile. | 19 | 121 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g0318 | Mch-Chr5:2165835 | Mch7g0755 | Mch-Chr7:12182975 | 2.89E-48 | dispersed | |
Mch5g0318 | Mch-Chr5:2165835 | Mch7g0754 | Mch-Chr7:12166732 | 1.32E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43324 | PF03195 | LOB | 4.30E-36 | No_clan | Mch | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch5g0318 | K21994 | - | csv:101216934 | 290.041 |