Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch5g0321 | CTTCCGCCGCCGTTCCTCTCAAGAGACCTCCACCTCCACTTCCTCCACCAAAACTCCGATCAACAACACAACGGCAACGGCGCCGCCGCCGTGGAACCCAGAGAGATGAGCTGCGGCGCCGCCGCAACAGACGTCGGCGAGGCCTCGCGGAGACCCCGCGGCCGCCCCGCAGGGTCGAAGAACAAGCCGAAGCCGCCGATGATCATAACACGTGACAGCGCCAACGCCCTCCGCTGCCACGTCATCGAAATTGCCAACGCCTCCGACGTCATCGAAACCCTCACCATCTTCACACGTCAGCGCCAACGTGGCATTTGCATTCTCACCGGCGCCGGTACCGTCTCCAACGTCACCCTCAAACAGCCGGCCTCTCCCGCCGGAGCCGTCATCTCTCTGCCGGGGAGATTCGAGATTCTTTCCCTGTCGGGCTCGTTTCTGCCGCCGCCGGCCCCGGCGGCGGCGTCCGGGCTGACCGTATACTTGTCCGGCGGGCAGGGGCAGGTGGTTGGAGGAAGCGTGGTGGGCCCACTTCTGACTTCGGGGCCGGTGGTGATTACTGCGGCTTCGTTCGGAAACGCGGCCTATGAGAGACTGCCGCTGGAGGAGGATGACGTGGCGGCGCCGCCACATGATGCCGGAAGTAGTCCGATTAGGTCGTCGGAAACCGCCGTGCAACAGCAACAATTTTTGCCGGAGCTTCATGGGATGGCGCCGCATCTTTTGAACACGTGTCAGTTGCCGACGGAACCCTACTGGGGCACAGGTCGTACTAATCCGCCATTT | 783 | 63.35 | LPPPFLSRDLHLHFLHQNSDQQHNGNGAAAVEPREMSCGAAATDVGEASRRPRGRPAGSKNKPKPPMIITRDSANALRCHVIEIANASDVIETLTIFTRQRQRGICILTGAGTVSNVTLKQPASPAGAVISLPGRFEILSLSGSFLPPPAPAAASGLTVYLSGGQGQVVGGSVVGPLLTSGPVVITAASFGNAAYERLPLEEDDVAAPPHDAGSSPIRSSETAVQQQQFLPELHGMAPHLLNTCQLPTEPYWGTGRTNPPF | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2192294 | 2193076 | + | MC05g0292 | Mch5g0321 | 687740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch5g0321 | 261 | MobiDBLite | consensus disorder prediction | 37 | 68 | - | - | |
Mch5g0321 | 261 | FunFam | AT-hook motif nuclear-localized protein | 77 | 205 | - | - | |
Mch5g0321 | 261 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 74 | 206 | - | - | |
Mch5g0321 | 261 | ProSiteProfiles | PPC domain profile profile. | 74 | 211 | IPR005175 | - | |
Mch5g0321 | 261 | CDD | DUF296 | 78 | 146 | IPR005175 | - | |
Mch5g0321 | 261 | MobiDBLite | consensus disorder prediction | 204 | 224 | - | - | |
Mch5g0321 | 261 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 26 | 219 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Mch5g0321 | 261 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 78 | 190 | IPR005175 | - | |
Mch5g0321 | 261 | Gene3D | - | 77 | 206 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g0321 | Mch-Chr5:2192294 | Mch7g0752 | Mch-Chr7:12143320 | 1.61E-87 | dispersed | |
Mch5g0316 | Mch-Chr5:2139756 | Mch5g0321 | Mch-Chr5:2192294 | 2.53E-23 | proximal |
Pathway information
