Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g0332 | TACGCGCCGGTGTACGGCAGCGTGTACGGGCAGGCTTTGTACTTGAAGAAGCTGTTCGATCACCTGACGGAGGTGGCGAAGAAGCACGGCACATTCCGGCTGGTTGCGGCGGCGTACAGCGAAATATACACGATCGATCCGAGGAACATCGAGCACATATTGAAGACGAAATTCGACAAGTATTCAAAAGGAAGCAACAATCAAGCGGTGGTTGGGGATCTGTTTGGAGAGGGAATATTTGCAGTGGATGGAGAGAAGTGGAAGCAGCAGAGGAAGCTGGCTAGCTATGAATTCTCCACCAGGATTCTTAGGGATTTTAGCTGCTCAGTTTTCAGGAGAAACGCTGCTAAACTCGTTGGAGTTGTTTCCCAATTTGCCGCCATGGGTCGGCCCTTTGATATCCAGGATTTGCTAATGCGGAGCGCTTTGGACTCCATTTTCAAAGTTGGATTCGGCGTGGAATTGAATTGCTTGGAGGAATCGAGCAAAGAAGGGATCGGATTCATGAAAGCCTTTGATGATTCTAGTGCTCAGATTTTTTGGCGCTATATCGATCCCCTCTGGAAATTGAAAAGATTTCTCAACATCGGTTCCGAAGGTTCGTTGAGGAACAACATCAAAACCATCGATGCTTTTGTGCACCAGTTGATCAGAGACAAGAGGAAATTGCTTCAGCAACCTAATCTCAAGAATGACAAAGAGGACATACTTTGGAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCAATATCTAAGAGATATAGTCCTCAATTTCATGTTGGCTGGCAAAGATTCAAGTGGAGGAACTCTGTCCTGGTTCTTCTACATGCTATGCAAGAACCCTTTAATACAGGAAAAAATTGCAGAGGAAGTGAAGCAAGTTGTTGGAATTGAAGGGGAAGAAGCTGACATAAATTTGTTCATAGAAAACTTAACTGATTCAGCTCTGGACAAAATGCATTATCTTCATGCAGCATTGACAGAGACTCTGAGGCTCTATCCTCCAGTCCCTGTGGATGGAAGGACAGCAGAAATAGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACCTGGCCTATTCCATGGGAAGGATGCCCTGCCTCTGGGGAGAAGATGCTGAAGATTTTAAACCTGAAAGATGGCTTGAAAATGGAACTTTTCGGCCCGAATCGCCATTCAAATTCATCGCATTTCATGCGGGTCCTCGAATGTGTTTGGGAAAGGAATTTGCTTATAGACAAATGAAGATAGTGTCTGCTTCTCTGCTTCAATTTTTTAGATTCAAATTAGGTGATGCAACGAGGAATGTGACTTATAGGATCATGCTTACCCTTCACATTGATGGAGGTCTCCCTCTTCTTGCACTTCCCAGAAAGACCAAATTTGCCTAA | 1425 | 44.35 | YAPVYGSVYGQALYLKKLFDHLTEVAKKHGTFRLVAAAYSEIYTIDPRNIEHILKTKFDKYSKGSNNQAVVGDLFGEGIFAVDGEKWKQQRKLASYEFSTRILRDFSCSVFRRNAAKLVGVVSQFAAMGRPFDIQDLLMRSALDSIFKVGFGVELNCLEESSKEGIGFMKAFDDSSAQIFWRYIDPLWKLKRFLNIGSEGSLRNNIKTIDAFVHQLIRDKRKLLQQPNLKNDKEDILWRFLMESEKDPTRMNDQYLRDIVLNFMLAGKDSSGGTLSWFFYMLCKNPLIQEKIAEEVKQVVGIEGEEADINLFIENLTDSALDKMHYLHAALTETLRLYPPVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKEFAYRQMKIVSASLLQFFRFKLGDATRNVTYRIMLTLHIDGGLPLLALPRKTKFA | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2254719 | 2259505 | - | MC05g0301 | Mch5g0332 | 687751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g0332 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 409 | 418 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch5g0332 | 474 | Pfam | Cytochrome P450 | 15 | 445 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PANTHER | CYTOCHROME P450 | 2 | 462 | - | - | |
| Mch5g0332 | 474 | PRINTS | P450 superfamily signature | 416 | 427 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | P450 superfamily signature | 329 | 340 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | P450 superfamily signature | 266 | 283 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | P450 superfamily signature | 407 | 416 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | Gene3D | Cytochrome P450 | 2 | 468 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | CDD | CYP86A | 31 | 462 | - | - | |
| Mch5g0332 | 474 | PRINTS | E-class P450 group I signature | 406 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | E-class P450 group I signature | 275 | 301 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | E-class P450 group I signature | 255 | 272 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | E-class P450 group I signature | 416 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | PRINTS | E-class P450 group I signature | 328 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0332 | 474 | SUPERFAMILY | Cytochrome P450 | 2 | 469 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g0332 | Mch-Chr5:2254719 | Mch8g1809 | Mch-Chr8:18443489 | 3.56E-122 | dispersed | |
| Mch5g0332 | Mch-Chr5:2254719 | Mch5g0335 | Mch-Chr5:2308973 | 1.14E-167 | proximal |
Pathway information