Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch5g0335 | ATGATTTCCCTCAACTTTCTCTCAAACCCCATCTCAATCGCAGCTCTATTACTGCTGATTTCCATTTCTGTAAGCCAGATTATAGCTCGAAAACTGAGGGCCAAGAAGTATCATCCAATTGCAGGAACTGTGTTTCACCAGCTCCTCAATTTCCACCGATTGCATCATTACATGACAGATCTTGCTGGAAAGTATAAAACATACAGGCTTCTCGGCCCCTTCAGGGATGAGGTTTATACTTCCAACCCAGAAAATGTTGAGTATATTCTCAAAACCCACTTCGAGAATTTTGGCAAGGGGGAATATAACCACAAAATCCTTAAGGATCTTCTTGGTGATGGGATTTTCACAGTTGATGGAGAGAAATGGCGTCAGCAGAGGAAGGTTTCAAGCTACGAGTTCTCTACAAAAGTTCTAAGGGATTATAGCAGTGCCATCTTCAGAAAAACTGCGGTTAAACTAGCTGGTATCGTGTCCGAAGCTGCTATTTCGAACAAAGTCATCGATATTCAAGGTCTACTTATGAAATCAGCTCTAGATTCAATACTTCAAGTGTCATTTGGAATTGATATAGAAGATAGCATTCAAGGATCAGACGAAGAAATCACGAAATTTTCCACTGCTTTCGACACATCAAGTTCAATGACACTTTGGCGATATGTTGATGTATTCTGGCCAATCAAGAAGGCTCTGAATATTGGGTCAGAAGGTACCTTAAAAAAAAACATGAGCATTGTTGATGAGTACATATATAAGCTCATCCACAACGCACTCGGACAGAGGGACAAGTTGGGCAACAACACTGCTGTGAGAAAAGAAAACATCGTGTCGAGGTTTTTGCAAGCGGAAAACTCTGATGCAACATTTTTAAGAGATATTATTCTTAGTTTTGTCATAGCTGGAAAGGACACGACAGCTATTACTCTTGCTTGGTTCGTTTACATGCTTTGCAAGCATCCTGAAGTGCAGGAAAGAGTAGCTAGAGAGATCAAGGACGTGACGAATGTCGAAGACAGTACGACTTCTGCCGAGTTTGCAGGAAGCTTGACTGAAGAAGCTCTGGAGAAGATGCAGTTTCTCACTGCAGCTATAAATGAAACTCTTAGACTCTATCCTCCTGTTCCAGTGGACGCAAAGATTTGCTTGTCTGATGATACACTGCCGGATGGATTCAGTGTGAGAAAAGGAGATATGGTGGCATACCAACCATATGCAATGGGTAGGATGAAATTTATATGGGGCGAGGATGCCGACCAATTCCGACCTGACAGGTGGCTCAACGGAGATGGAATTTTGCAGCCTCAGAGCCCTTTCAAATTTACCGCCTTTCAGGCAGGGCCACGCATTTGTTTGGGAAAAGAGTTCGCATACAGGCAGATGAAGATCCTGTCATCTATATCATTGAGATTTTTTATTTTCAAAATGAGTGATGATAACAAAATTGTTATGTATAAACCAATGATCAATCTTCTCATAGATGGAGGCCTTCAAGTTTATGCTATTCCTAGACCTCCATACTAG | 1521 | 41.62 | MISLNFLSNPISIAALLLLISISVSQIIARKLRAKKYHPIAGTVFHQLLNFHRLHHYMTDLAGKYKTYRLLGPFRDEVYTSNPENVEYILKTHFENFGKGEYNHKILKDLLGDGIFTVDGEKWRQQRKVSSYEFSTKVLRDYSSAIFRKTAVKLAGIVSEAAISNKVIDIQGLLMKSALDSILQVSFGIDIEDSIQGSDEEITKFSTAFDTSSSMTLWRYVDVFWPIKKALNIGSEGTLKKNMSIVDEYIYKLIHNALGQRDKLGNNTAVRKENIVSRFLQAENSDATFLRDIILSFVIAGKDTTAITLAWFVYMLCKHPEVQERVAREIKDVTNVEDSTTSAEFAGSLTEEALEKMQFLTAAINETLRLYPPVPVDAKICLSDDTLPDGFSVRKGDMVAYQPYAMGRMKFIWGEDADQFRPDRWLNGDGILQPQSPFKFTAFQAGPRICLGKEFAYRQMKILSSISLRFFIFKMSDDNKIVMYKPMINLLIDGGLQVYAIPRPPY | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2308973 | 2312928 | - | MC05g_new0033 | Mch5g0335 | 687754 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch5g0335 | 506 | CDD | CYP86A | 66 | 496 | - | - | |
| Mch5g0335 | 506 | PRINTS | P450 superfamily signature | 441 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | P450 superfamily signature | 450 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | Gene3D | Cytochrome P450 | 29 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | E-class P450 group I signature | 440 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PRINTS | E-class P450 group I signature | 450 | 473 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | PANTHER | CYTOCHROME P450 | 22 | 496 | - | - | |
| Mch5g0335 | 506 | SUPERFAMILY | Cytochrome P450 | 36 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch5g0335 | 506 | Pfam | Cytochrome P450 | 38 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g0335 | Mch-Chr5:2308973 | Mch8g1809 | Mch-Chr8:18443489 | 3.21E-126 | dispersed | |
| Mch5g0332 | Mch-Chr5:2254719 | Mch5g0335 | Mch-Chr5:2308973 | 1.14E-167 | proximal |
Pathway information